RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 TEX2Q8IWB9 1127 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 GLIS3Q8NEA6 775 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 C2orf40Q9H1Z8 148 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 BFARQ9NZS9 450 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 RBP3P10745 1247 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 LCP1P13796 627 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 TAF1BQ53T94 588 aaPredicted RBP18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 KRT80Q6KB66 452 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 SYN2Q92777 582 aaPredicted RBP18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 UNC45AQ9H3U1 944 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 NPHS2Q9NP85 383 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 ABCF3Q9NUQ8 709 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 PFDN6O15212 129 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 SLURP2P0DP57 97 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 RAB44Q7Z6P3 723 aaPredicted RBP18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 TRIM56Q9BRZ2 755 aaKnown RBP18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 SPATS2LQ9NUQ6 558 aaKnown RBP18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 INTS13Q9NVM9 706 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 STOML1Q9UBI4 398 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 ARL2BPQ9Y2Y0 163 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 KIF20BQ96Q89 1820 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 PDGFRBP09619 1106 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 ANXA13P27216 316 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 SLC1A1P43005 524 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 ACTR2P61160 394 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 MDM2Q00987 491 aaPredicted RBP18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 TMEM62Q0P6H9 643 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 ERP27Q96DN0 273 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 SENP7Q9BQF6 1050 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 FAM49BQ9NUQ9 324 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 PSD3Q9NYI0 1048 aa18.1■□□□□ 0.49
SLC1A4-201ENST00000234256 ADGRB2O60241 1585 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 TTC36A6NLP5 189 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 PTGISQ16647 500 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 SLC10A5Q5PT55 438 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 SLC13A5Q86YT5 568 aaPredicted RBP18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 BEST2Q8NFU1 509 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 PPP1R36Q96LQ0 422 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 USP15Q9Y4E8 981 aaPredicted RBP18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 CLGNO14967 610 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 MYL3P08590 195 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 TNFAIP2Q03169 654 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 TBX2Q13207 712 aaPredicted RBP18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 EMC2Q15006 297 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 SLC4A9Q96Q91 983 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 FAF1Q9UNN5 650 aaPredicted RBP18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 FAM107AO95990 144 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 GTF2H1P32780 548 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 GPAT2Q6NUI2 795 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 LPAR1Q92633 364 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 PNMA5Q96PV4 448 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 POLR3CQ9BUI4 534 aaPredicted RBP18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 RIOX1Q9H6W3 641 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 TMEM8AQ9HCN3 771 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 GTSE1Q9NYZ3 720 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 ANGPTL2Q9UKU9 493 aa18.09■□□□□ 0.49
SLC1A4-201ENST00000234256 E2F8A0AVK6 867 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 MAGEA4P43358 317 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 EFNA5P52803 228 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 DNAJC3Q13217 504 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 ANLNQ9NQW6 1124 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 SLC12A6Q9UHW9 1150 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 EIF3DO15371 548 aaKnown RBP eCLIP18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 ZWINTO95229 277 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 GYS1P13807 737 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 MAPK7Q13164 816 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 KCTD19Q17RG1 926 aaPredicted RBP18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 CYP4A22Q5TCH4 519 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 C3orf62Q6ZUJ4 267 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 TRMT10CQ7L0Y3 403 aaKnown RBP18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 PDCD6IPQ8WUM4 868 aaKnown RBP18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 SEPT1Q8WYJ6 367 aa18.08■□□□□ 0.49
SLC1A4-201ENST00000234256 SPATA31A5Q5VU36 1347 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 SPATA31A7Q8IWB4 1347 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 CNTNAP4Q9C0A0 1308 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 RARBP10826 455 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 TMEM259Q4ZIN3 620 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 LRIG3Q6UXM1 1119 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 OR6P1Q8NGX9 317 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 SLC20A1Q8WUM9 679 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 FGD4Q96M96 766 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 DDX56Q9NY93 547 aaKnown RBP18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 KRT10P13645 584 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 COILP38432 576 aaPredicted RBP18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 COPS2P61201 443 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 RABGAP1LQ5R372 815 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 NT5DC1Q5TFE4 455 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 AP1ARQ63HQ0 302 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 RSBN1LQ6PCB5 846 aaPredicted RBP18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 VGLL2Q8N8G2 317 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 STAP1Q9ULZ2 295 aa18.08■□□□□ 0.48
SLC1A4-201ENST00000234256 ZBTB39O15060 712 aa18.07■□□□□ 0.48
SLC1A4-201ENST00000234256 FDX1P10109 184 aa18.07■□□□□ 0.48
SLC1A4-201ENST00000234256 ORC1Q13415 861 aa18.07■□□□□ 0.48
SLC1A4-201ENST00000234256 ZNF280CQ8ND82 737 aa18.07■□□□□ 0.48
SLC1A4-201ENST00000234256 DHX38Q92620 1227 aaKnown RBP18.07■□□□□ 0.48
SLC1A4-201ENST00000234256 SDCCAG3Q96C92 435 aa18.07■□□□□ 0.48
SLC1A4-201ENST00000234256 WDR70Q9NW82 654 aa18.07■□□□□ 0.48
SLC1A4-201ENST00000234256 USP20Q9Y2K6 914 aa18.07■□□□□ 0.48
SLC1A4-201ENST00000234256 ATP5HO75947 161 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms