RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 RBM5P52756 815 aaKnown RBP eCLIP18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 CACNA2D1P54289 1103 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 RCN1Q15293 331 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 LLGL1Q15334 1064 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 SGO2Q562F6 1265 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 PRUNE1Q86TP1 453 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 DENND1AQ8TEH3 1009 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 MAML1Q92585 1016 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 PCDHAC2Q9Y5I4 1007 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 ZMYM2Q9UBW7 1377 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 COL2A1P02458 1487 aaPredicted RBP18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 MTA2O94776 668 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 AKR1B1P15121 316 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 MUTP22033 750 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 NFIAQ12857 509 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 DYNC1I2Q13409 638 aaKnown RBP18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 PTK6Q13882 451 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 STAT4Q14765 748 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 TRIP13Q15645 432 aaPredicted RBP18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 RBM26Q5T8P6 1007 aaKnown RBP18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 TIPINQ9BVW5 301 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 PPP1R12CQ9BZL4 782 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 JMJD4Q9H9V9 463 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 MTMR4Q9NYA4 1195 aa18.8■□□□□ 0.6
CDKN1B-201ENST00000228872 ATMINO43313 823 aaPredicted RBP18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 TRIM49P0CI25 452 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 TRIM49CP0CI26 452 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 EIF6P56537 245 aaKnown RBP18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 SPARCL1Q14515 664 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 ZC3H12AQ5D1E8 599 aaKnown RBP18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 PHLDB3Q6NSJ2 640 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 ZNF746Q6NUN9 644 aaPredicted RBP18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 DSTYKQ6XUX3 929 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 CLEC10AQ8IUN9 316 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 BTBD6Q96KE9 485 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 ZFP69BQ9UJL9 534 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 FSCN2O14926 492 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 SORBS3O60504 671 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 TJP3O95049 919 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 HLA-DOAP06340 250 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 SPATA31C1P0DKV0 1188 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 MYL7Q01449 175 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 CDR2Q01850 454 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 CAV1Q03135 178 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 ZC3H18Q86VM9 953 aaKnown RBP18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 LRRC47Q8N1G4 583 aaKnown RBP18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 RBM41Q96IZ5 413 aaKnown RBP18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 CCDC77Q9BR77 488 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 CADM1Q9BY67 442 aaKnown RBP18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 CHST7Q9NS84 486 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 SERPINB13Q9UIV8 391 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 ANAPC5Q9UJX4 755 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 GRID1Q9ULK0 1009 aa18.79■□□□□ 0.6
CDKN1B-201ENST00000228872 TBCAO75347 108 aaKnown RBP18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 KRT36O76013 467 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 SPIRE1Q08AE8 756 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 PDK4Q16654 411 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 ARMC3Q5W041 872 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 MAIP1Q8WWC4 291 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 TRAIPQ9BWF2 469 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 FAM198AQ9UFP1 575 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 MAGEA13PA6NCF6 341 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 RAD17O75943 681 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 ATF2P15336 505 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 SLC45A4Q5BKX6 768 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 SYDE1Q6ZW31 735 aaPredicted RBP18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 TRABD2AQ86V40 505 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 ADGRF4Q8IZF3 695 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 PSPC1Q8WXF1 523 aaKnown RBP18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 GATA6Q92908 595 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 MKNK1Q9BUB5 465 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 PSTPIP2Q9H939 334 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 SAR1AQ9NR31 198 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 LTBP3Q9NS15 1303 aa18.78■□□□□ 0.6
CDKN1B-201ENST00000228872 FAM196BA6NMK8 535 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 HNRNPCL1O60812 293 aaKnown RBP18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 LRRC74BQ6ZQY2 392 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 NLRP9Q7RTR0 991 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 RIBC1Q8N443 379 aaPredicted RBP18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 AGBL3Q8NEM8 1001 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 FAM81AQ8TBF8 368 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 ATG4AQ8WYN0 398 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 C9orf72Q96LT7 481 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 PPP1R1BQ9UD71 204 aaPredicted RBP18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 PRPF4O43172 522 aaKnown RBP eCLIP18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 RPA1P27694 616 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 RANBP1P43487 201 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 COG2Q14746 738 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 NFIL3Q16649 462 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 CTC1Q2NKJ3 1217 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 ACSBG2Q5FVE4 666 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 CCNJLQ8IV13 435 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 SLFN12Q8IYM2 578 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 ERMNQ8TAM6 284 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 ZNF564Q8TBZ8 553 aaPredicted RBP18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 PCDHB18PQ96TA0 734 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 FAM192AQ9GZU8 254 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 CYLDQ9NQC7 956 aa18.77■□□□□ 0.6
CDKN1B-201ENST00000228872 METTL5Q9NRN9 209 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms