RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	ZRG17	P53735	605 aa		1.17	□□□□□ -2.22
SMC4	YLR086W	AAH1	P53909	347 aa		1.17	□□□□□ -2.22
SMC4	YLR086W	YNL134C	P53912	376 aa	Known RBP	1.17	□□□□□ -2.22
SMC4	YLR086W	TIM8	P57744	87 aa		1.17	□□□□□ -2.22
SMC4	YLR086W	RRP17	Q04031	235 aa	Predicted RBP	1.17	□□□□□ -2.22
SMC4	YLR086W	SPC24	Q04477	213 aa		1.17	□□□□□ -2.22
SMC4	YLR086W	YAL067W-A	Q8TGK6	75 aa		1.17	□□□□□ -2.22
SMC4	YLR086W	RHO1	P06780	209 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	YOL163W	P0CF20	169 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	COX10	P21592	462 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	PPH21	P23594	369 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	POF1	P25576	258 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	KRE6	P32486	720 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	CDC13	P32797	924 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	SIP3	P38717	1229 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	YHR045W	P38775	560 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	YHB1	P39676	399 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	KRE29	P40026	464 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	MRH4	P53166	561 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	YDR115W	Q04598	105 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	LDB18	Q07887	179 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	RRP40	Q08285	240 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	YPQ1	Q12010	308 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	PER33	Q12144	273 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	ATG5	Q12380	294 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	PHO13	P19881	312 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	VPS1	P21576	704 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	NTG1	P31378	399 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	SMB1	P40018	196 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	PRE6	P40303	254 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	YIA6	P40556	373 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	PRP24	P49960	444 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	MRPL50	P53724	139 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	YNL095C	P53932	642 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	ECM11	Q04110	302 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	INM2	Q05533	292 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	LIP2	Q06005	328 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	COQ10	Q08058	207 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	YCT1	Q12235	531 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	NOT5	Q12514	560 aa	Predicted RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	YRF1-3	P0CX14	1859 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	YRF1-7	P0CX15	1859 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	YRF1-6	P53819	1859 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	ERD2	P18414	219 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	ICL1	P28240	557 aa	Predicted RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	ERG2	P32352	222 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	ZRT3	P34240	503 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	TRM7	P38238	310 aa	Known RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	YBR096W	P38256	230 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	SUR2	P38992	349 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	GAA1	P39012	614 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	SLX9	P53251	210 aa	Predicted RBP	1.16	□□□□□ -2.22
SMC4	YLR086W	RSM27	P53305	110 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	CTF19	Q02732	369 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	PET117	Q02771	107 aa		1.16	□□□□□ -2.22
SMC4	YLR086W	CSG2	P35206	410 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	ECM13	P38195	257 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	TEM1	P38987	245 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	SPO73	P40031	143 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	MCM22	P47167	239 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	MIC26	P50087	233 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	FMP48	P53233	369 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	NRM1	P53718	249 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	PGA2	P53903	129 aa		1.15	□□□□□ -2.22
SMC4	YLR086W	YPR147C	Q06522	304 aa	Known RBP	1.15	□□□□□ -2.22
SMC4	YLR086W	PRP11	Q07350	266 aa	Predicted RBP	1.15	□□□□□ -2.22
SMC4	YLR086W	SYC1	Q08553	188 aa	Predicted RBP	1.15	□□□□□ -2.22
SMC4	YLR086W	ABP140	Q08641	628 aa	Known RBP	1.15	□□□□□ -2.22
SMC4	YLR086W	YGL041W-A	P0C5N3	154 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	SSO1	P32867	290 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	SNZ3	P43545	298 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	LSM1	P47017	172 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	CPR7	P47103	393 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	YJR149W	P47177	404 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	FLC3	P53121	802 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	SNZ2	P53824	298 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	OSH6	Q02201	448 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	YPL113C	Q02961	396 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	YML108W	Q03759	105 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	SMD2	Q06217	110 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	CDC33	P07260	213 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	FBA1	P14540	359 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	PCL1	P24867	279 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	RAD51	P25454	400 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	PBN1	P25580	416 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	CAM1	P29547	415 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	IES6	P32617	166 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	YCR087C-A	P37263	153 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	POP8	P38208	133 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	YHL049C	P38722	271 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	BIG1	P38813	335 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	RAD17	P48581	401 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	SLM2	P53955	656 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	TMA20	P89886	181 aa	Predicted RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	HPT1	Q04178	221 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	UTP15	Q04305	513 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	YMR226C	Q05016	267 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	ARC18	Q05933	178 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	PRR2	Q12310	699 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	HKR1	P41809	1802 aa		1.15	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms