RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 TTC13Q8NBP0 860 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 FBXO30Q8TB52 745 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC12Q8WUD4 166 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KCTD4Q8WVF5 259 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 ASZ1Q8WWH4 475 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KCNN1Q92952 543 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 TUBGCP3Q96CW5 907 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 RMDN1Q96DB5 314 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PPP1R36Q96LQ0 422 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 NUP88Q99567 741 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 SLF1Q9BQI6 1058 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 BPIFA3Q9BQP9 254 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 FAM126AQ9BYI3 521 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 STN1Q9H668 368 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PIH1D3Q9NQM4 214 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 GIMAP4Q9NUV9 329 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 KIF17Q9P2E2 1029 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 EFR3BQ9Y2G0 817 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PCDHGB5Q9Y5G0 923 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 FADS3Q9Y5Q0 445 aa4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 GPC6Q9Y625 555 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-220ENST00000628915 PTCH1Q13635 1447 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CDHR2Q9BYE9 1310 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 TYW5A2RUC4 315 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC160A6NGH7 325 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 A6NJY4 79 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 NBPF26B4DH59 902 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 LRRN2O75325 713 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT6AP02538 564 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT6BP04259 564 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 GSTT2P0CG29 244 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 GSTT2BP0CG30 244 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CPA3P15088 417 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 BTF3P20290 206 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ATP4AP20648 1035 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 COG7P83436 770 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SPIRE1Q08AE8 756 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 DNAJC3Q13217 504 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 STIM1Q13586 685 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 RAPSNQ13702 412 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 EFTUD2Q15029 972 aaKnown RBP eCLIP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 WSCD2Q2TBF2 565 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 GFOD2Q3B7J2 385 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 MMEL1Q495T6 779 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 OTUD7BQ6GQQ9 843 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ARMCX5Q6P1M9 558 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF852Q6ZMS4 543 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 METTL3Q86U44 580 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CLVS1Q8IUQ0 354 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SIRT2Q8IXJ6 389 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 HACE1Q8IYU2 909 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKRD35Q8N283 1001 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 FAM26EQ8N5C1 309 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF594Q96JF6 807 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 RPRD1AQ96P16 312 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 USP28Q96RU2 1077 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SEC62Q99442 399 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CGREF1Q99674 301 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 NUDT12Q9BQG2 462 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 MMRN2Q9H8L6 949 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC35C2Q9NQQ7 365 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 MBD2Q9UBB5 411 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PACSIN2Q9UNF0 486 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PPP2R2CQ9Y2T4 447 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 MAFBQ9Y5Q3 323 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 DGKBQ9Y6T7 804 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ADGRL3Q9HAR2 1447 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 KDRP35968 1356 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 LAMA2P24043 3122 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 ITIH6Q6UXX5 1313 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CYP2D7A0A087X1C5 515 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 A0A0G2JS52 829 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 TNFRSF10AO00220 468 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 IRS4O14654 1257 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 BIRC5O15392 142 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC7A4O43246 635 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PEX1O43933 1283 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CUTAO60888 179 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 N4BP1O75113 896 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 NPR1P16066 1061 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CNTFP26441 200 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 AFF1P51825 1210 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 IST1P53990 364 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CACNB3P54284 484 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 USP46P62068 366 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PFKPQ01813 784 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 MXD4Q14582 209 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 USP39Q53GS9 565 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PRPF38BQ5VTL8 546 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PDPK2PQ6A1A2 396 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 WDR93Q6P2C0 686 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CDH24Q86UP0 819 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 UNC45BQ8IWX7 931 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC13Q8IYE1 715 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 AOPEPQ8N6M6 819 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 IGSF22Q8N9C0 903 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 MTMR14Q8NCE2 650 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 KCNH5Q8NCM2 988 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 PIK3C3Q8NEB9 887 aa4.11□□□□□ -1.75
R3HDM1-220ENST00000628915 OR6C4Q8NGE1 309 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms