RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 A0A1W2PQC6 194 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 K7ENM7 598 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 TMCC2O75069 709 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 PSMD10O75832 226 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 KIAA0754O94854 1291 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 ASMTLO95671 621 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 GH1P01241 217 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 SMPD1P17405 629 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 TECP42680 631 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 PRCPP42785 496 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 KRT76Q01546 638 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 PLCB3Q01970 1234 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 SP2Q02086 613 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 MRPL28Q13084 256 aaKnown RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 IL17AQ16552 155 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 WHAMMP3Q1A5X7 153 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 ADSSL1Q8N142 457 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 LILRB1Q8NHL6 650 aaPredicted RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 FBF1Q8TES7 1133 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 JAKMIP2Q96AA8 810 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 NUP58Q9BVL2 599 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 JPH1Q9HDC5 661 aaPredicted RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 ALG13Q9NP73 1137 aaKnown RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 ZNF180Q9UJW8 692 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 PNMA8BQ9ULN7 279 aaPredicted RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 DHX15O43143 795 aaKnown RBP12.48□□□□□ -0.41
LINC00538-201ENST00000626109 SEPT4O43236 478 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 SLC4A1P02730 911 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 CTNNA1P35221 906 aaKnown RBP12.48□□□□□ -0.41
LINC00538-201ENST00000626109 KRT9P35527 623 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00538-201ENST00000626109 PLCB4Q15147 1175 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 TUBB8Q3ZCM7 444 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 CELF3Q5SZQ8 465 aaKnown RBP12.48□□□□□ -0.41
LINC00538-201ENST00000626109 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 METTL7BQ6UX53 244 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 CYFIP1Q7L576 1253 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 DHTKD1Q96HY7 919 aaPredicted RBP12.48□□□□□ -0.41
LINC00538-201ENST00000626109 MTRQ99707 1265 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 GBP3Q9H0R5 595 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 TAB2Q9NYJ8 693 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 C6orf203Q9P0P8 240 aaPredicted RBP12.48□□□□□ -0.41
LINC00538-201ENST00000626109 SLC9A2Q9UBY0 812 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 VAV3Q9UKW4 847 aa12.48□□□□□ -0.41
LINC00538-201ENST00000626109 LUC7L2Q9Y383 392 aaKnown RBP12.48□□□□□ -0.41
LINC00538-201ENST00000626109 BHMG1C9JSJ3 638 aaPredicted RBP12.47□□□□□ -0.41
LINC00538-201ENST00000626109 ZBTB24O43167 697 aaPredicted RBP12.47□□□□□ -0.41
LINC00538-201ENST00000626109 CHMP2AO43633 222 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 FARP2O94887 1054 aaPredicted RBP12.47□□□□□ -0.41
LINC00538-201ENST00000626109 TYRP1P17643 537 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 CCND3P30281 292 aaPredicted RBP12.47□□□□□ -0.41
LINC00538-201ENST00000626109 MAPK9P45984 424 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 DNM2P50570 870 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 SP4Q02446 784 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 EIF2B5Q13144 721 aaKnown RBP12.47□□□□□ -0.41
LINC00538-201ENST00000626109 NCAPH2Q6IBW4 605 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 KLHL23Q8NBE8 558 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 OR6J1Q8NGC5 347 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 COPS5Q92905 334 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 IQCDQ96DY2 449 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 THAP11Q96EK4 314 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 ZNHIT6Q9NWK9 470 aaKnown RBP12.47□□□□□ -0.41
LINC00538-201ENST00000626109 CTAGE15A4D2H0 777 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 POTEMA6NI47 508 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
LINC00538-201ENST00000626109 RASA4O43374 803 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 CTAGE8P0CG41 777 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 SETSIPP0DME0 302 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 RARBP10826 455 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 CAPN3P20807 821 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 SFNP31947 248 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 JAK3P52333 1124 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 KRT83P78385 493 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 TMEM63BQ5T3F8 832 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 MIER3Q7Z3K6 550 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 TLK2Q86UE8 772 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 CTAGE6Q86UF2 777 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 CTAGE4Q8IX94 777 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 EHBP1Q8NDI1 1231 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 ERMNQ8TAM6 284 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 AFAP1L1Q8TED9 768 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 SPATA33Q96N06 139 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 AP5M1Q9H0R1 490 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 UNC45AQ9H3U1 944 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 HAUS4Q9H6D7 363 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 KBTBD4Q9NVX7 518 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 CEP72Q9P209 647 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 ZFATQ9P243 1243 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 LRWD1Q9UFC0 647 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 Q9Y3F1 56 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 SAMM50Q9Y512 469 aa12.47□□□□□ -0.41
LINC00538-201ENST00000626109 LGALS16A8MUM7 142 aa12.46□□□□□ -0.42
LINC00538-201ENST00000626109 WDR64B1ANS9 1081 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms