RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PDXDC1Q6P996 788 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 TPRG1Q6ZUI0 275 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 MAEAQ7L5Y9 396 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 GAS2L3Q86XJ1 694 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 GPR161Q8N6U8 529 aaKnown RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 ITFG1Q8TB96 612 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 LNX1Q8TBB1 728 aaPredicted RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 OXER1Q8TDS5 423 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 PIGOQ8TEQ8 1089 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 ING5Q8WYH8 240 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 GBP4Q96PP9 640 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 ADPGKQ9BRR6 497 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 DDX23Q9BUQ8 820 aaKnown RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 PANK2Q9BZ23 570 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 OSBPL6Q9BZF3 934 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 GZF1Q9H116 711 aaPredicted RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 TTC12Q9H892 705 aaPredicted RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 LTB4R2Q9NPC1 389 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 RRAGDQ9NQL2 400 aaPredicted RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 ANKEF1Q9NU02 776 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 PRMT7Q9NVM4 692 aaPredicted RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 HCFC1R1Q9NWW0 138 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 CDV3Q9UKY7 258 aaKnown RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 F5P12259 2224 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 COL4A3Q01955 1670 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 ADAM12O43184 909 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 RECQL4O94761 1208 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 LYPLA2O95372 231 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 PTMSP20962 102 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 OR1D2P34982 312 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 CALCRLQ16602 461 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 SKOR2Q2VWA4 1001 aaPredicted RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 RSPO2Q6UXX9 243 aaPredicted RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 ZNF852Q6ZMS4 543 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 ZBTB8OSQ8IWT0 167 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 NPAS3Q8IXF0 933 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 PRIMPOLQ96LW4 560 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 CNTNAP3BQ96NU0 1288 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 HSD17B14Q9BPX1 270 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 CNTNAP3Q9BZ76 1288 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 GJB4Q9NTQ9 266 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 ZSCAN32Q9NX65 697 aa8.64□□□□□ -1.03
CLK1-215ENST00000621181 SMG5Q9UPR3 1016 aaKnown RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 MRPS17Q9Y2R5 130 aaKnown RBP8.64□□□□□ -1.03
CLK1-215ENST00000621181 PATJQ8NI35 1801 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 PTGESO14684 152 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 N4BP3O15049 544 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 B3GAT3O94766 335 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 LMNB2Q03252 620 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 SCRN1Q12765 414 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 UVSSAQ2YD98 709 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 NELL2Q99435 816 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 BRMS1Q9HCU9 246 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 GPRC5CQ9NQ84 441 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 HEBP1Q9NRV9 189 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 PDRG1Q9NUG6 133 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 SNTG2Q9NY99 539 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 DNMT3BQ9UBC3 853 aaKnown RBP8.63□□□□□ -1.03
CLK1-215ENST00000621181 KCNH3Q9ULD8 1083 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 USP18Q9UMW8 372 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 MRPS23Q9Y3D9 190 aaKnown RBP8.63□□□□□ -1.03
CLK1-215ENST00000621181 CDY1Q9Y6F8 540 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 VWA8A3KMH1 1905 aa8.63□□□□□ -1.03
CLK1-215ENST00000621181 A0A087WWV3 80 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 FAM205CA6NFA0 338 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 NEMFO60524 1076 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 RHOP08100 348 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 LIG1P18858 919 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 ATP2B1P20020 1258 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 TARSP26639 723 aaKnown RBP8.62□□□□□ -1.03
CLK1-215ENST00000621181 KRT2P35908 639 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 TXKP42681 527 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 RPS9P46781 194 aaKnown RBP8.62□□□□□ -1.03
CLK1-215ENST00000621181 ADCY1Q08828 1119 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 NR5A1Q13285 461 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 PRPF4BQ13523 1007 aaKnown RBP8.62□□□□□ -1.03
CLK1-215ENST00000621181 RAB33AQ14088 237 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 MAPK6Q16659 721 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 EARS2Q5JPH6 523 aaKnown RBP8.62□□□□□ -1.03
CLK1-215ENST00000621181 TSSK4Q6SA08 328 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.62□□□□□ -1.03
CLK1-215ENST00000621181 NOSTRINQ8IVI9 506 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 ZBTB44Q8NCP5 570 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 MCPH1Q8NEM0 835 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 EPC1Q9H2F5 836 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 PDZD7Q9H5P4 517 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 GRPEL1Q9HAV7 217 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 GDE1Q9NZC3 331 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 GMEB2Q9UKD1 530 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 GDAQ9Y2T3 454 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 ZDHHC9Q9Y397 364 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 CFAP47Q6ZTR5 3102 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 STK36Q9NRP7 1315 aa8.62□□□□□ -1.03
CLK1-215ENST00000621181 PRR5-ARHGAP8B1AHC4 643 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 TRAPPC3O43617 180 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 DTNBO60941 627 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 ECI2O75521 394 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 POU2F2P09086 479 aa8.61□□□□□ -1.03
CLK1-215ENST00000621181 ATXN1P54253 815 aaKnown RBP8.61□□□□□ -1.03
CLK1-215ENST00000621181 ARHGAP8P85298 464 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms