RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 A0A1B0GW55 424 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 FAM47DPA6NHR8 397 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 APOA1P02647 267 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DUX4L2P0CJ85 424 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DUX4L3P0CJ86 424 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DUX4L4P0CJ87 422 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DUX4L5P0CJ88 424 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DUX4L6P0CJ89 424 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DUX4L7P0CJ90 424 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 TYK2P29597 1187 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 ACADSBP45954 432 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 TMEM132DQ14C87 1099 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 XRRA1Q6P2D8 792 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 TTC23LQ6PF05 361 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SP8Q8IXZ3 490 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 CALML6Q8TD86 181 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PPP1R16BQ96T49 567 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SLC38A7Q9NVC3 462 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SELENONQ9NZV5 590 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DUX4Q9UBX2 424 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 FMN2Q9NZ56 1722 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 C16orf96A6NNT2 1141 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 GSG1L2A8MUP6 293 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 EIF3HO15372 352 aaKnown RBP eCLIP4.81□□□□□ -1.642e-6■■■■■ 27
CHD9-221ENST00000615216 PDHA1P08559 390 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 MDH1P40925 334 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 FOXO4P98177 505 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 VEPH1Q14D04 833 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SZRD1Q7Z422 152 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 NEDD1Q8NHV4 660 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 KIF12Q96FN5 646 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 OSBPL1AQ9BXW6 950 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 CD209Q9NNX6 404 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 HDAC6Q9UBN7 1215 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 NEURL4Q96JN8 1562 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PI4K2BG5E9Z4 385 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PSMD14O00487 310 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 MYL2P10916 166 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PGM1P36871 562 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 FMO5P49326 533 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SULT1E1P49888 294 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 KCNA1Q09470 495 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 LBRQ14739 615 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 HLFQ16534 295 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 CEP55Q53EZ4 464 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 NUDT18Q6ZVK8 323 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 METTL16Q86W50 562 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 SLC26A7Q8TE54 656 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 NDEL1Q9GZM8 345 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DHX35Q9H5Z1 703 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 RAVER2Q9HCJ3 691 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 TJP2Q9UDY2 1190 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SEPT3Q9UH03 358 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DCTN4Q9UJW0 460 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 TTC7AQ9ULT0 858 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 KIF1AQ12756 1690 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 KCNN4O15554 427 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 MTSS1O43312 755 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 TRAPPC3O43617 180 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 CDH16O75309 829 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DGAT1O75907 488 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SBK1Q52WX2 424 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SCN4BQ8IWT1 228 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 GSPT2Q8IYD1 628 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 RNF25Q96BH1 459 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 TMEM260Q9NX78 707 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SRP68Q9UHB9 627 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 VPS9D1Q9Y2B5 631 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP15Q9Y4E8 981 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 PTPRUQ92729 1446 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 NWD1Q149M9 1564 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 H0Y626 953 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PSTPIP1O43586 416 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SUPT3HO75486 399 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 TRIM16O95361 564 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 MAP4P27816 1152 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 NME3Q13232 169 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 ARID5BQ14865 1188 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 LLGL1Q15334 1064 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 BTBD8Q5XKL5 378 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SWSAP1Q6NVH7 229 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 TERB1Q8NA31 727 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 APPL2Q8NEU8 664 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SLC35G2Q8TBE7 412 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DCUN1D1Q96GG9 259 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 WRNIP1Q96S55 665 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 KATNAL1Q9BW62 490 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DDX47Q9H0S4 455 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 FAM217BQ9NTX9 383 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 BAZ2BQ9UIF8 2168 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 NMT2O60551 498 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RHOBTB3O94955 611 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 MMP10P09238 476 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 FGFR4P22455 802 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 ADORA2BP29275 332 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 RBP5P82980 135 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 POU5F1BQ06416 359 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 MRPL28Q13084 256 aaKnown RBP4.8□□□□□ -1.64
CHD9-221ENST00000615216 MFN1Q8IWA4 741 aa4.8□□□□□ -1.64
CHD9-221ENST00000615216 PGBD4Q96DM1 585 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms