RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MYBL2P10244 700 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 RBP3P10745 1247 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 OSMP13725 252 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 AGXTP21549 392 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 SLC5A3P53794 718 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 WNT3AP56704 352 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 CLUL1Q15846 466 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 ABCB5Q2M3G0 1257 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 HS1BP3Q53T59 392 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 BRDTQ58F21 947 aaPredicted RBP4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 MUM1L1Q5H9M0 696 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 ZNF585AQ6P3V2 769 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 PRRT2Q7Z6L0 340 aaPredicted RBP4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 GPR156Q8NFN8 814 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 OR5M3Q8NGP4 307 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 RIN2Q8WYP3 895 aaPredicted RBP4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 FUBP3Q96I24 572 aaKnown RBP eCLIP4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 SLC2A13Q96QE2 648 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 C1QTNF3Q9BXJ4 246 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 ASPSCR1Q9BZE9 553 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 KLC2Q9H0B6 622 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 ENKD1Q9H0I2 346 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 TLR9Q9NR96 1032 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 ZNF277Q9NRM2 450 aaPredicted RBP4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 POGKQ9P215 609 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 SCOCQ9UIL1 159 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 JAG2Q9Y219 1238 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 SH3BP1Q9Y3L3 701 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 TCAF1Q9Y4C2 921 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 TNKSO95271 1327 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 AFF2P51816 1311 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 PLCH1Q4KWH8 1693 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 ATP7BP35670 1465 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 SHTN1A0MZ66 631 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 AKR1B10O60218 316 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 PHF2O75151 1096 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 ACO1P21399 889 aaKnown RBP4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 CASRP41180 1078 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 ADAM17P78536 824 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 DUSP2Q05923 314 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 MALLQ13021 153 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 PCBP2Q15366 365 aaKnown RBP eCLIP4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 MEX3CQ5U5Q3 659 aaKnown RBP4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 MBNL2Q5VZF2 373 aaKnown RBP4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 MAMDC4Q6UXC1 1216 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 D2HGDHQ8N465 521 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 EDAQ92838 391 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 DVL3Q92997 716 aaPredicted RBP4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 GREM2Q9H772 168 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 PCDHGA2Q9Y5H1 932 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 TNS3Q68CZ2 1445 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 ARHGEF10O15013 1369 aa4.78□□□□□ -1.64
CKS1BP3-201ENST00000600888 SLIT2O94813 1529 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 KLHL33A6NCF5 533 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 FZD9O00144 591 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 HOXA3O43365 443 aaPredicted RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 PCDHGA12O60330 932 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 GASTP01350 101 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 GSPT1P15170 499 aaKnown RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 GYPEP15421 78 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 ZNF20P17024 532 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 ADSLP30566 484 aaPredicted RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 SELENOPP49908 381 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 RBM6P78332 1123 aaKnown RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 EXOSC10Q01780 885 aaKnown RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 HHEXQ03014 270 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 FKBP15Q5T1M5 1219 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 FAM180AQ6UWF9 173 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 KRT28Q7Z3Y7 464 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 SGMS1Q86VZ5 419 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 LILRA3Q8N6C8 439 aaPredicted RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 SSH1Q8WYL5 1049 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 JADE3Q92613 823 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 ARL8AQ96BM9 186 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 FAM89AQ96GI7 184 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 ZNF512Q96ME7 567 aaPredicted RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 ADOQ96SZ5 270 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 RBM12Q9NTZ6 932 aaKnown RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 ZBTB21Q9ULJ3 1066 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 SPEF1Q9Y4P9 236 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 PCDHGA9Q9Y5G4 932 aaKnown RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 PCDHGA8Q9Y5G5 932 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 PCDHGA7Q9Y5G6 932 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 PCDHGA6Q9Y5G7 932 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 PCDHGA3Q9Y5H0 932 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 AKAP12Q02952 1782 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 ATRNO75882 1429 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 NRAPQ86VF7 1730 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 POLR3AO14802 1390 aaPredicted RBP4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 GPRASP1Q5JY77 1395 aa4.77□□□□□ -1.65
CKS1BP3-201ENST00000600888 BRWD3Q6RI45 1802 aa4.76□□□□□ -1.65
CKS1BP3-201ENST00000600888 BCL9LQ86UU0 1499 aa4.76□□□□□ -1.65
CKS1BP3-201ENST00000600888 PHRF1Q9P1Y6 1649 aaKnown RBP4.76□□□□□ -1.65
CKS1BP3-201ENST00000600888 COL14A1Q05707 1796 aaKnown RBP4.76□□□□□ -1.65
CKS1BP3-201ENST00000600888 ITGA10O75578 1167 aa4.76□□□□□ -1.65
CKS1BP3-201ENST00000600888 STC2O76061 302 aa4.76□□□□□ -1.65
CKS1BP3-201ENST00000600888 BUD31P41223 144 aaPredicted RBP4.76□□□□□ -1.65
CKS1BP3-201ENST00000600888 MCAMP43121 646 aa4.76□□□□□ -1.65
CKS1BP3-201ENST00000600888 GZMKP49863 264 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms