RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SAMD11Q96NU1 681 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 ACAP3Q96P50 834 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 CASD1Q96PB1 797 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 MED15Q96RN5 788 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 TMEM117Q9H0C3 514 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 UBN1Q9NPG3 1134 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 KLK14Q9P0G3 267 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 CTNND2Q9UQB3 1225 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 SPTBN4Q9H254 2564 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 RALGAPA2Q2PPJ7 1873 aa20.51■□□□□ 0.87
CCDC9-205ENST00000600117 CITO14578 2027 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 HOXA2O43364 376 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 LETM1O95202 739 aaPredicted RBP20.5■□□□□ 0.87
CCDC9-205ENST00000600117 LDHAP00338 332 aaKnown RBP20.5■□□□□ 0.87
CCDC9-205ENST00000600117 ADRB2P07550 413 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 MLH1P40692 756 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 CYP2J2P51589 502 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 AFF1P51825 1210 aaKnown RBP20.5■□□□□ 0.87
CCDC9-205ENST00000600117 MYBPC2Q14324 1141 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 COL19A1Q14993 1142 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 ENOX2Q16206 610 aaKnown RBP20.5■□□□□ 0.87
CCDC9-205ENST00000600117 SLC10A6Q3KNW5 377 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 XKR4Q5GH76 650 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 FOXR2Q6PJQ5 311 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 GLB1LQ6UWU2 654 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 ALKAL1Q6UXT8 129 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 ZC3H3Q8IXZ2 948 aaKnown RBP20.5■□□□□ 0.87
CCDC9-205ENST00000600117 GPD1LQ8N335 351 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 XXYLT1Q8NBI6 393 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 GSTCDQ8NEC7 633 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 SP7Q8TDD2 431 aaPredicted RBP20.5■□□□□ 0.87
CCDC9-205ENST00000600117 MFSD14AQ96MC6 490 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 ZFP42Q96MM3 310 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 GAD1Q99259 594 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 DUSP9Q99956 384 aaKnown RBP20.5■□□□□ 0.87
CCDC9-205ENST00000600117 FAM213AQ9BRX8 229 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 FUCA2Q9BTY2 467 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 TECTAO75443 2155 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 ZFHX2Q9C0A1 2572 aaPredicted RBP20.5■□□□□ 0.87
CCDC9-205ENST00000600117 CACNA1HO95180 2353 aa20.5■□□□□ 0.87
CCDC9-205ENST00000600117 TRIP11Q15643 1979 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 SYCE3A1L190 88 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 ARL5CA6NH57 179 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 CXCL8P10145 99 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 POU5F1Q01860 360 aaKnown RBP20.49■□□□□ 0.87
CCDC9-205ENST00000600117 LRRC63Q05C16 580 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 TYRO3Q06418 890 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 PAK1Q13153 545 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 STX1AQ16623 288 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 EPC2Q52LR7 807 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 HFE2Q6ZVN8 426 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 CBWD2Q8IUF1 395 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 ADHFE1Q8IWW8 467 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 MIOSQ9NXC5 875 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 ANK1P16157 1881 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 NLRC5Q86WI3 1866 aa20.49■□□□□ 0.87
CCDC9-205ENST00000600117 TTC26A0AVF1 554 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 TBKBP1A7MCY6 615 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 PTGESO14684 152 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 NR2F2P24468 414 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 CASP4P49662 377 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 YARSP54577 528 aaKnown RBP20.48■□□□□ 0.87
CCDC9-205ENST00000600117 WNT7BP56706 349 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 STX17P56962 302 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 ZSCAN23Q3MJ62 389 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 NOMO2Q5JPE7 1267 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 C11orf57Q6ZUT1 292 aaPredicted RBP20.48■□□□□ 0.87
CCDC9-205ENST00000600117 BRSK2Q8IWQ3 736 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 CMTR2Q8IYT2 770 aaKnown RBP20.48■□□□□ 0.87
CCDC9-205ENST00000600117 YME1L1Q96TA2 773 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 TSG101Q99816 390 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 RPF1Q9H9Y2 349 aaKnown RBP20.48■□□□□ 0.87
CCDC9-205ENST00000600117 KIAA1586Q9HCI6 787 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 TOPORSQ9NS56 1045 aaPredicted RBP20.48■□□□□ 0.87
CCDC9-205ENST00000600117 ANO10Q9NW15 660 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 CNTN3Q9P232 1028 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 RWDD2AQ9UIY3 292 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 INPP5FQ9Y2H2 1132 aa20.48■□□□□ 0.87
CCDC9-205ENST00000600117 BICDL2A1A5D9 508 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 LACTBL1A8MY62 500 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 H3BNC9 293 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 SCNN1GP51170 649 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 PAN2Q504Q3 1202 aaKnown RBP20.47■□□□□ 0.87
CCDC9-205ENST00000600117 TCEAL5Q5H9L2 206 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 CT47A1Q5JQC4 288 aaPredicted RBP20.47■□□□□ 0.87
CCDC9-205ENST00000600117 LRRC55Q6ZSA7 311 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 ABI1Q8IZP0 508 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 RSPH1Q8WYR4 309 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 ZMAT2Q96NC0 199 aaKnown RBP20.47■□□□□ 0.87
CCDC9-205ENST00000600117 PLEKHA5Q9HAU0 1116 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 DACH1Q9UI36 760 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 PLAGL2Q9UPG8 496 aa20.47■□□□□ 0.87
CCDC9-205ENST00000600117 PDCD11Q14690 1871 aaKnown RBP20.47■□□□□ 0.87
CCDC9-205ENST00000600117 ZNF233A6NK53 670 aa20.46■□□□□ 0.87
CCDC9-205ENST00000600117 EXOC3O60645 756 aa20.46■□□□□ 0.87
CCDC9-205ENST00000600117 KCNE1P15382 129 aa20.46■□□□□ 0.87
CCDC9-205ENST00000600117 RPL13P26373 211 aaKnown RBP20.46■□□□□ 0.87
CCDC9-205ENST00000600117 ERCC5P28715 1186 aaPredicted RBP20.46■□□□□ 0.87
CCDC9-205ENST00000600117 IRS1P35568 1242 aa20.46■□□□□ 0.87
CCDC9-205ENST00000600117 FKBP3Q00688 224 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms