RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 HASPINQ8TF76 798 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 SNX27Q96L92 541 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 ZNF396Q96N95 335 aaPredicted RBP11.5□□□□□ -0.57
CCDC9-203ENST00000596938 TSPAN18Q96SJ8 248 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 FIZ1Q96SL8 496 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 CLSTN3Q9BQT9 956 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 HAPLN2Q9GZV7 340 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 ST6GALNAC4Q9H4F1 302 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 MAN1C1Q9NR34 630 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 CDH22Q9UJ99 828 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
CCDC9-203ENST00000596938 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.5□□□□□ -0.57
CCDC9-203ENST00000596938 CCDC195A0A1B0GUA6 201 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 MEFVO15553 781 aaPredicted RBP11.49□□□□□ -0.57
CCDC9-203ENST00000596938 PPP6R2O75170 966 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
CCDC9-203ENST00000596938 WEE2P0C1S8 567 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 IGFBP6P24592 240 aaPredicted RBP11.49□□□□□ -0.57
CCDC9-203ENST00000596938 LIG4P49917 911 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 ZXDAP98168 799 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 SOX4Q06945 474 aaPredicted RBP11.49□□□□□ -0.57
CCDC9-203ENST00000596938 PRSS55Q6UWB4 352 aaPredicted RBP11.49□□□□□ -0.57
CCDC9-203ENST00000596938 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
CCDC9-203ENST00000596938 CCDC73Q6ZRK6 1079 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 SV2BQ7L1I2 683 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 ZNF720Q7Z2F6 126 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 CEP57Q86XR8 500 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 BICD1Q96G01 975 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 ZDHHC7Q9NXF8 308 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 ANKFY1Q9P2R3 1169 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 SEL1LQ9UBV2 794 aa11.49□□□□□ -0.57
CCDC9-203ENST00000596938 A0A0B4J269 797 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 TTC26A0AVF1 554 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 MYMKA6NI61 221 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 C2CD4DB7Z1M9 353 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 K7ENM7 598 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 PODXLO00592 558 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 SPTLC2O15270 562 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 OGTO15294 1046 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 YEATS4O95619 227 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 ADRB2P07550 413 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 SPATA31D3P0C874 917 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 HARSP12081 509 aaKnown RBP11.48□□□□□ -0.57
CCDC9-203ENST00000596938 RPL17P18621 184 aaKnown RBP11.48□□□□□ -0.57
CCDC9-203ENST00000596938 MATR3P43243 847 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC9-203ENST00000596938 RAB33AQ14088 237 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 STK38Q15208 465 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 ZBTB6Q15916 424 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 PSMD5Q16401 504 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 PTPN21Q16825 1174 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 ATL3Q6DD88 541 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 TRIM67Q6ZTA4 783 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 SPATA31D4Q6ZUB0 917 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 ANKS3Q6ZW76 656 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 RTL10Q7L3V2 364 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 OTOP3Q7RTS5 596 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 BMP8AQ7Z5Y6 402 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 MAP4K3Q8IVH8 894 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 KREMEN2Q8NCW0 462 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 C3orf58Q8NDZ4 430 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 DDX12PQ92771 950 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 DNAJC19Q96DA6 116 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 ZHX3Q9H4I2 956 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 GOLGA2P5Q9HBQ8 144 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 WDR6Q9NNW5 1121 aaKnown RBP11.48□□□□□ -0.57
CCDC9-203ENST00000596938 TSHZ2Q9NRE2 1034 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
CCDC9-203ENST00000596938 BACE2Q9Y5Z0 518 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 STYXL1Q9Y6J8 313 aa11.48□□□□□ -0.57
CCDC9-203ENST00000596938 HNRNPDLO14979 420 aaKnown RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 FAM189A1O60320 539 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 RFPL2O75678 378 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 ZMYND10O75800 440 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 HSP90AA1P07900 732 aaKnown RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 ZSCAN22P10073 491 aaPredicted RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 GAP43P17677 238 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 CYP3A5P20815 502 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 NMT1P30419 496 aaKnown RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 POU5F1Q01860 360 aaKnown RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 UVSSAQ2YD98 709 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 SEZ6Q53EL9 994 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 ZC2HC1CQ53FD0 456 aaPredicted RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 SLFN12LQ6IEE8 588 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 CD302Q8IX05 232 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 FEZF2Q8TBJ5 459 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 C18orf25Q96B23 403 aaPredicted RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 ZNF707Q96C28 371 aaPredicted RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 ACSF2Q96CM8 615 aaPredicted RBP11.47□□□□□ -0.57
CCDC9-203ENST00000596938 HVCN1Q96D96 273 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 STRA6Q9BX79 667 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 PANK2Q9BZ23 570 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 PRKD2Q9BZL6 878 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 MTRRQ9UBK8 725 aa11.47□□□□□ -0.57
CCDC9-203ENST00000596938 A0A087X0B3 334 aa11.46□□□□□ -0.57
CCDC9-203ENST00000596938 LACTBL1A8MY62 500 aa11.46□□□□□ -0.57
CCDC9-203ENST00000596938 SYN3O14994 580 aa11.46□□□□□ -0.57
CCDC9-203ENST00000596938 CUTAO60888 179 aa11.46□□□□□ -0.57
CCDC9-203ENST00000596938 PPP1R37O75864 691 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms