RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 LACTBL1A8MY62 500 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 TMEM189-UBE2V1I3L0A0 370 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 PER2O15055 1255 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 FAM189A1O60320 539 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 B3GAT3O94766 335 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 ADRB2P07550 413 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 CYP3A5P20815 502 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 KCNA5P22460 613 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 TNFSF9P41273 254 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 GLUD2P49448 558 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 CREMQ03060 361 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 EHHADHQ08426 723 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 ENOX2Q16206 610 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 EPM2AIP1Q7L775 607 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 PPFIBP1Q86W92 1011 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 HPS3Q969F9 1004 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 FAM212AQ96EL1 285 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 KIF12Q96FN5 646 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 ZMAT2Q96NC0 199 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 VN1R3Q9BXE9 311 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 FGFBP2Q9BYJ0 223 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 HOOK1Q9UJC3 728 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 UBQLN1Q9UMX0 589 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 DERAQ9Y315 318 aa18.8■□□□□ 0.6
SHKBP1-212ENST00000596163 TISP43B9A030 160 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 KIF20AO95235 890 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 EFEMP2O95967 443 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 ADSSP30520 456 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 ACOT2P49753 483 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 NDUFV1P49821 464 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 CLCNKBP51801 687 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 FAM160A1Q05DH4 1040 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 UPP1Q16831 310 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 LEXMQ3ZCV2 418 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 TJAP1Q5JTD0 557 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 ARMCX5Q6P1M9 558 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 PDXDC1Q6P996 788 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 HS2ST1Q7LGA3 356 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 RNF168Q8IYW5 571 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 RABGGTAQ92696 567 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 PAAF1Q9BRP4 392 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 SLC39A2Q9NP94 309 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 CGNQ9P2M7 1197 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 FAM50BQ9Y247 325 aa18.79■□□□□ 0.6
SHKBP1-212ENST00000596163 A0A0C4DFX4 3053 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 PODXLO00592 558 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 KLRC4O43908 158 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 EXTL3O43909 919 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 KIF4AO95239 1232 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 IL18RAPO95256 599 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 RPN1P04843 607 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 GTF2F1P35269 517 aaKnown RBP eCLIP18.78■□□□□ 0.61e-6■■■■■ 54.6
SHKBP1-212ENST00000596163 DSG1Q02413 1049 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 ZBTB41Q5SVQ8 909 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 FMR1NBQ8N0W7 255 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 AUTS2Q8WXX7 1259 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 CASP10Q92851 521 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 TIGD1Q96MW7 591 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 FAM213AQ9BRX8 229 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 GPR62Q9BZJ7 368 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 KIAA1586Q9HCI6 787 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 CHST7Q9NS84 486 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 NUB1Q9Y5A7 615 aa18.78■□□□□ 0.6
SHKBP1-212ENST00000596163 F8W810 466 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 C2CD2LO14523 706 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 MEFVO15553 781 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 LILRB3O75022 631 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 CLASP2O75122 1294 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 KLRC2P26717 231 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 TFF2Q03403 129 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 DPYDQ12882 1025 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 ZBTB6Q15916 424 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 BMT2Q1RMZ1 405 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 FAM171A1Q5VUB5 890 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 KIAA0319Q5VV43 1072 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 TMEM184AQ6ZMB5 413 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 TAS1R1Q7RTX1 841 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 NT5DC4Q86YG4 428 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 GLIS3Q8NEA6 775 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 GOLGA5Q8TBA6 731 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 HASPINQ8TF76 798 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 SCFD1Q8WVM8 642 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 C18orf25Q96B23 403 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 KLHL5Q96PQ7 755 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 TTPALQ9BTX7 342 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 IKZF4Q9H2S9 585 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 GOLGA2P5Q9HBQ8 144 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 CACNG4Q9UBN1 327 aa18.77■□□□□ 0.6
SHKBP1-212ENST00000596163 PLXNA4Q9HCM2 1894 aa18.76■□□□□ 0.59
SHKBP1-212ENST00000596163 LINC01565O15544 149 aa18.76■□□□□ 0.59
SHKBP1-212ENST00000596163 ADH1AP07327 375 aa18.76■□□□□ 0.59
SHKBP1-212ENST00000596163 PAX3P23760 479 aa18.76■□□□□ 0.59
SHKBP1-212ENST00000596163 LRPAP1P30533 357 aa18.76■□□□□ 0.59
SHKBP1-212ENST00000596163 LTBRP36941 435 aa18.76■□□□□ 0.59
SHKBP1-212ENST00000596163 SOX4Q06945 474 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-212ENST00000596163 TMEM132DQ14C87 1099 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms