RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 RTP2Q5QGT7 225 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 SPATA31D4Q6ZUB0 917 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 C18orf25Q96B23 403 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-219ENST00000580540 DHX58Q96C10 678 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 UROC1Q96N76 676 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 FIZ1Q96SL8 496 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 MSTO1Q9BUK6 570 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 RXFP1Q9HBX9 757 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 MAN1C1Q9NR34 630 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.15■□□□□ 0.5
SREBF1-219ENST00000580540 CFAP45Q9UL16 551 aa18.15■□□□□ 0.5
SREBF1-219ENST00000580540 I3L4J1 428 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 TULP1O00294 542 aaPredicted RBP18.14■□□□□ 0.49
SREBF1-219ENST00000580540 CLTAP09496 248 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 KCNE1P15382 129 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 GAP43P17677 238 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 ABCD1P33897 745 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 TNFSF9P41273 254 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 MTHFRP42898 656 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 UPP1Q16831 310 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 ATAT1Q5SQI0 421 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 SHC4Q6S5L8 630 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 ZNF720Q7Z2F6 126 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 RNF135Q8IUD6 432 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 KCNG4Q8TDN1 519 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 DNAJC19Q96DA6 116 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 FAM212AQ96EL1 285 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 DDX27Q96GQ7 796 aaKnown RBP18.14■□□□□ 0.49
SREBF1-219ENST00000580540 RIPOR3Q96MK2 946 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 SFXN1Q9H9B4 322 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 CNTN3Q9P232 1028 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 C5orf42Q9H799 3197 aa18.14■□□□□ 0.49
SREBF1-219ENST00000580540 CITO14578 2027 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 ANKRD63C9JTQ0 380 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 PODXLO00592 558 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 MEFVO15553 781 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-219ENST00000580540 GCNT3O95395 438 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 PIGRP01833 764 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 BRCC3P46736 316 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 PSMD5Q16401 504 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 ZBTB41Q5SVQ8 909 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 ATL3Q6DD88 541 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 ELMSAN1Q6PJG2 1045 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 MAP4K3Q8IVH8 894 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 KCNN1Q92952 543 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 NECTIN4Q96NY8 510 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 C1QTNF1Q9BXJ1 281 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 POMKQ9H5K3 350 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 RPF1Q9H9Y2 349 aaKnown RBP18.13■□□□□ 0.49
SREBF1-219ENST00000580540 PANK4Q9NVE7 773 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 FNIP2Q9P278 1114 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 SEL1LQ9UBV2 794 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 PCDHA7Q9UN72 937 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 MUC3AQ02505 3323 aa18.13■□□□□ 0.49
SREBF1-219ENST00000580540 LOC730098B7Z3J9 87 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 TISP43B9A030 160 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 PI4K2BG5E9Z4 385 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 TMEM189-UBE2V1I3L0A0 370 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 OGTO15294 1046 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 DCXO43602 365 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 TRAPPC3O43617 180 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 ALADP13716 330 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 CREMQ03060 361 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 PPP2R3AQ06190 1150 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 KYAT1Q16773 422 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 AXDND1Q5T1B0 1012 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-219ENST00000580540 ADALQ6DHV7 355 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 SLC39A4Q6P5W5 647 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-219ENST00000580540 GPR65Q8IYL9 337 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 IQUBQ8NA54 791 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 C3orf58Q8NDZ4 430 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 LNX1Q8TBB1 728 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-219ENST00000580540 FEZF2Q8TBJ5 459 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 KIF12Q96FN5 646 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 IKZF4Q9H2S9 585 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 ST6GALNAC4Q9H4F1 302 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 PLEKHA5Q9HAU0 1116 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 FAM13BQ9NYF5 915 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 TUBGCP4Q9UGJ1 667 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 DPP7Q9UHL4 492 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 MUTYHQ9UIF7 546 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 NUB1Q9Y5A7 615 aa18.12■□□□□ 0.49
SREBF1-219ENST00000580540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-219ENST00000580540 A0A0B4J269 797 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 FAM86C2PA6NEL3 165 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 LACTBL1A8MY62 500 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 TGM5O43548 720 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 TKTP29401 623 aaKnown RBP18.11■□□□□ 0.49
SREBF1-219ENST00000580540 RPL9P32969 192 aaKnown RBP18.11■□□□□ 0.49
SREBF1-219ENST00000580540 ENOX2Q16206 610 aaKnown RBP18.11■□□□□ 0.49
SREBF1-219ENST00000580540 SLFN12LQ6IEE8 588 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 CD300LGQ6UXG3 332 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 CCDC65Q8IXS2 484 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 SYCP3Q8IZU3 236 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 TMEM130Q8N3G9 435 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 PIK3R5Q8WYR1 880 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 ACCSQ96QU6 501 aa18.11■□□□□ 0.49
SREBF1-219ENST00000580540 LRRC27Q9C0I9 530 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms