RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 TSPAN18Q96SJ8 248 aa17.24■□□□□ 0.35
CSNK1D-212ENST00000580061 POP1Q99575 1024 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-212ENST00000580061 TMEM117Q9H0C3 514 aa17.24■□□□□ 0.35
CSNK1D-212ENST00000580061 INPP5FQ9Y2H2 1132 aa17.24■□□□□ 0.35
CSNK1D-212ENST00000580061 DERAQ9Y315 318 aa17.24■□□□□ 0.35
CSNK1D-212ENST00000580061 PTPRJQ12913 1337 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 TULP1O00294 542 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 GJB5O95377 273 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 NFICP08651 508 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 TRIM49P0CI25 452 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 TRIM49CP0CI26 452 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 DLATP10515 647 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 BMP8BP34820 402 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 MTIF2P46199 727 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 SCNN1GP51170 649 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 DCAF17Q5H9S7 520 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 NOMO2Q5JPE7 1267 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 FAM117BQ6P1L5 589 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 NT5DC4Q86YG4 428 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 WDR49Q8IV35 697 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 ZNF689Q96CS4 500 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 KIF12Q96FN5 646 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 PPP1R10Q96QC0 940 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 CGRRF1Q99675 332 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 RC3H2Q9HBD1 1191 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 PLAGL2Q9UPG8 496 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 C2CD2Q9Y426 696 aa17.23■□□□□ 0.35
CSNK1D-212ENST00000580061 POMCP01189 267 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 THP07101 528 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 ATP2A2P16615 1042 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 TNNI1P19237 187 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 GRIK3Q13003 919 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 TMEM132DQ14C87 1099 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 NAB2Q15742 525 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 TCERG1LQ5VWI1 586 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 LMBRD2Q68DH5 695 aaPredicted RBP17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 HERC6Q8IVU3 1022 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 URGCPQ8TCY9 931 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 ZNF516Q92618 1163 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 SLC35C1Q96A29 364 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 TUBGCP2Q9BSJ2 902 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 INTS13Q9NVM9 706 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 KANSL3Q9P2N6 904 aa17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-212ENST00000580061 KIAA1671Q9BY89 1806 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 TBKBP1A7MCY6 615 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 AP3M2P53677 418 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 HTRA4P83105 476 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 PPP3CAQ08209 521 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 KRT31Q15323 416 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 MAN2A1Q16706 1144 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 DUOXA2Q1HG44 320 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 OR5B17Q8NGF7 314 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 FAM84AQ96KN4 292 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 MRPL9Q9BYD2 267 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 SLC38A7Q9NVC3 462 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 TBC1D13Q9NVG8 400 aa17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 UBQLN1Q9UMX0 589 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.35
CSNK1D-212ENST00000580061 LRRC10BA6NIK2 292 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 STX10O60499 249 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 C4BPAP04003 597 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 TMEM191BP0C7N4 346 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 CYP3A5P20815 502 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 GTF2H1P32780 548 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 TFAMQ00059 246 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 KCNH2Q12809 1159 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 PAN2Q504Q3 1202 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 C15orf39Q6ZRI6 1047 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 CMTR2Q8IYT2 770 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 CACTINQ8WUQ7 758 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 C18orf25Q96B23 403 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 ANKRD36BP1Q96IX9 119 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 YME1L1Q96TA2 773 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 MTMR12Q9C0I1 747 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 TAB2Q9NYJ8 693 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 TUBGCP4Q9UGJ1 667 aa17.2■□□□□ 0.34
CSNK1D-212ENST00000580061 LAMA2P24043 3122 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 DDHD2O94830 711 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 TNNC2P02585 160 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 AFPP02771 609 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 GCLMP48507 274 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 COPB1P53618 953 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 SOX4Q06945 474 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 ZACNQ401N2 412 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 CBWD6Q4V339 395 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 CBWD3Q5JTY5 395 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 MIIPQ5JXC2 388 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 CBWD5Q5RIA9 395 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 TRAPPC11Q7Z392 1133 aa17.19■□□□□ 0.34
CSNK1D-212ENST00000580061 LRRC43Q8N309 656 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms