RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 BMS1Q14692 1282 aaKnown RBP7.56□□□□□ -1.2
SPG11-224ENST00000561268 PTPN21Q16825 1174 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 NT5DC1Q5TFE4 455 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 RINT1Q6NUQ1 792 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 SASS6Q6UVJ0 657 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 CYP26C1Q6V0L0 522 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 BRAPQ7Z569 592 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 GPR149Q86SP6 731 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 CDR2LQ86X02 465 aaPredicted RBP7.56□□□□□ -1.2
SPG11-224ENST00000561268 ZDHHC14Q8IZN3 488 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 SYT2Q8N9I0 419 aaPredicted RBP7.56□□□□□ -1.2
SPG11-224ENST00000561268 HDAC7Q8WUI4 952 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 SPIRE2Q8WWL2 714 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 PIK3R5Q8WYR1 880 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 DRC1Q96MC2 740 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 PAAF1Q9BRP4 392 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 TRIM6Q9C030 488 aaPredicted RBP7.56□□□□□ -1.2
SPG11-224ENST00000561268 NT5C3AQ9H0P0 336 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 GBP3Q9H0R5 595 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 CDT1Q9H211 546 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.56□□□□□ -1.2
SPG11-224ENST00000561268 RAPGEFL1Q9UHV5 662 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 ADAM28Q9UKQ2 775 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 KIAA1024Q9UPX6 916 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 MTMR6Q9Y217 621 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 SSX2IPQ9Y2D8 614 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 FAN1Q9Y2M0 1017 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 PRG3Q9Y2Y8 225 aaPredicted RBP7.56□□□□□ -1.2
SPG11-224ENST00000561268 WDFY4Q6ZS81 3184 aa7.56□□□□□ -1.2
SPG11-224ENST00000561268 SF3B1O75533 1304 aaKnown RBP eCLIP7.55□□□□□ -1.2
SPG11-224ENST00000561268 C2CD4DB7Z1M9 353 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 TEX28O15482 410 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 MEFVO15553 781 aaPredicted RBP7.55□□□□□ -1.2
SPG11-224ENST00000561268 FAM189A1O60320 539 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 HIP1RO75146 1068 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 KIF4AO95239 1232 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 CXCL14O95715 111 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 PIGRP01833 764 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 ALDH2P05091 517 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 ADH1AP07327 375 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 AKAP5P24588 427 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 GRM5P41594 1212 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 NCKAP1LP55160 1127 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 ZXDAP98168 799 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 CREMQ03060 361 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 SIGLEC14Q08ET2 396 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 NCBP1Q09161 790 aaKnown RBP7.55□□□□□ -1.2
SPG11-224ENST00000561268 DMP1Q13316 513 aaPredicted RBP7.55□□□□□ -1.2
SPG11-224ENST00000561268 ATF7IP2Q5U623 682 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 KRT79Q5XKE5 535 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 LLGL2Q6P1M3 1020 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 LILRA6Q6PI73 481 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 CD300LGQ6UXG3 332 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 ALKAL1Q6UXT8 129 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 DTHD1Q6ZMT9 781 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 HFE2Q6ZVN8 426 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 MAEAQ7L5Y9 396 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 CEP120Q8N960 986 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 TMEM161BQ8NDZ6 487 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 DEPTORQ8TB45 409 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 ZNF707Q96C28 371 aaPredicted RBP7.55□□□□□ -1.2
SPG11-224ENST00000561268 KCTD12Q96CX2 325 aaKnown RBP7.55□□□□□ -1.2
SPG11-224ENST00000561268 SNX27Q96L92 541 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 IFT74Q96LB3 600 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 FBXL18Q96ME1 805 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 RIPOR3Q96MK2 946 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 FIZ1Q96SL8 496 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 ACO2Q99798 780 aaKnown RBP7.55□□□□□ -1.2
SPG11-224ENST00000561268 ADPGKQ9BRR6 497 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 EMILIN2Q9BXX0 1053 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 GPR62Q9BZJ7 368 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 CXCL16Q9H2A7 254 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 MRPL17Q9NRX2 175 aaKnown RBP7.55□□□□□ -1.2
SPG11-224ENST00000561268 BLOC1S4Q9NUP1 217 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 CNTN3Q9P232 1028 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 FBXW11Q9UKB1 542 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 ODF2LQ9ULJ1 636 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 NR2E1Q9Y466 385 aa7.55□□□□□ -1.2
SPG11-224ENST00000561268 THP07101 528 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 ADRB2P07550 413 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 MAPTP10636 758 aaKnown RBP7.54□□□□□ -1.2
SPG11-224ENST00000561268 PLS3P13797 630 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 KCNE1P15382 129 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 SCP2P22307 547 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 FGFR3P22607 806 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 CDC25AP30304 524 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 HOXA9P31269 272 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 OR1G1P47890 313 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 PEX3P56589 373 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 RESTQ13127 1097 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 PTPAQ15257 358 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 SYCP1Q15431 976 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 USP41Q3LFD5 358 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 ZNF568Q3ZCX4 644 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 RTP2Q5QGT7 225 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 RARS2Q5T160 578 aaKnown RBP7.54□□□□□ -1.2
SPG11-224ENST00000561268 CES5AQ6NT32 575 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 MPZL3Q6UWV2 235 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 ZPBP2Q6X784 338 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms