RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RBM15Q96T37 977 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■□□□ 12.1
PPP4R3A-208ENST00000555462 NAP1L4Q99733 375 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 NOP53Q9NZM5 478 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 LARSQ9P2J5 1176 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZNF148Q9UQR1 794 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 MIF4GDA9UHW6 222 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 NEFHP12036 1026 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 ACOT2P49753 483 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 SPP2Q13103 211 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 MDH1BQ5I0G3 518 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 NPHS2Q9NP85 383 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 KCNH7Q9NS40 1196 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 NOCTQ9UK39 431 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 TESPA1A2RU30 521 aaPredicted RBP18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 GHRP10912 638 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 CA4P22748 312 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 PCK1P35558 622 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 ITIH4Q14624 930 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 ANKRD20A2Q5SQ80 823 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 ANKRD20A1Q5TYW2 823 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 ANKRD20A3Q5VUR7 823 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 CCDC17Q96LX7 622 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 COA1Q9GZY4 146 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 COL20A1Q9P218 1284 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 ARL2BPQ9Y2Y0 163 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 FOSP01100 380 aaPredicted RBP18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 LACTBP83111 547 aaPredicted RBP18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 STXBP4Q6ZWJ1 553 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 LONP2Q86WA8 852 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 MBOAT7Q96N66 472 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 KIAA1683Q9H0B3 1180 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 DMAC2Q9NW81 257 aa18.16■□□□□ 0.5
PPP4R3A-208ENST00000555462 RPA3P35244 121 aaPredicted RBP18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 CPA2P48052 419 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 RAD23BP54727 409 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 ATP11AP98196 1134 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 GNPTABQ3T906 1256 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 RC3H1Q5TC82 1133 aaKnown RBP18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 UTP4Q969X6 686 aaKnown RBP18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 CENPTQ96BT3 561 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 TEKT3Q9BXF9 490 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZCWPW1Q9H0M4 648 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 ATP9AO75110 1047 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 ADSSP30520 456 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 AOC3Q16853 763 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 TMEM130Q8N3G9 435 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZBTB10Q96DT7 871 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 PPP1R12CQ9BZL4 782 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 WNT8AQ9H1J5 351 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 GRID1Q9ULK0 1009 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZBTB12Q9Y330 459 aaPredicted RBP18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 TNNI1P19237 187 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 TMEM179Q6ZVK1 233 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZBED8Q8IZ13 594 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 SNF8Q96H20 258 aa18.15■□□□□ 0.5
PPP4R3A-208ENST00000555462 A0A0G2JND7 137 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 DENND3A2RUS2 1198 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 EIF3DO15371 548 aaKnown RBP eCLIP18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 MAP3K6O95382 1288 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 GM2AP17900 193 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 TAC1P20366 129 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 SMTNL2Q2TAL5 461 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 TMEM63BQ5T3F8 832 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 FOXR2Q6PJQ5 311 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 UBN1Q9NPG3 1134 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 NYAP2Q9P242 653 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 PARP2Q9UGN5 583 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 BNIP1Q12981 228 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 TXNRD3NBQ6F5E7 133 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 SV2AQ7L0J3 742 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 ADAMTSL1Q8N6G6 1762 aa18.14■□□□□ 0.49
PPP4R3A-208ENST00000555462 HNRNPDLO14979 420 aaKnown RBP18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 TBX3O15119 743 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 MAP3K13O43283 966 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 PLS3P13797 630 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 ATP2A2P16615 1042 aaKnown RBP18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 THEMIS2Q5TEJ8 643 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 LDHDQ86WU2 507 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 C3orf20Q8ND61 904 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 CKAP2Q8WWK9 683 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 CD101Q93033 1021 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 STMN4Q9H169 189 aaPredicted RBP18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 PHTF1Q9UMS5 762 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 GAS8O95995 478 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 FGFR1P11362 822 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 CNGA1P29973 690 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 WNT7BP56706 349 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 RPL7AP62424 266 aaKnown RBP18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 GPS1Q13098 491 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 SLC1A5Q15758 541 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 CRY2Q49AN0 593 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 PCNX4Q63HM2 1172 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 PRR11Q96HE9 360 aaPredicted RBP18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 L3MBTL3Q96JM7 780 aaPredicted RBP18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 DNPEPQ9ULA0 475 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 C21orf2O43822 256 aa18.13■□□□□ 0.49
PPP4R3A-208ENST00000555462 RAD17O75943 681 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms