RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TCP11Q8WWU5 503 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 NLRP4Q96MN2 994 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 SYNCQ9H7C4 482 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 CD248Q9HCU0 757 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 NFS1Q9Y697 457 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 NHSQ6T4R5 1651 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 BTNL10A8MVZ5 291 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 SPAG7O75391 227 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 MAP3K6O95382 1288 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 CLTAP09496 248 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 ETS1P14921 441 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 ATF2P15336 505 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 GNA15P30679 374 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 CHRNA3P32297 505 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 DRP2Q13474 957 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 SLC39A4Q6P5W5 647 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 USP37Q86T82 979 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 IWS1Q96ST2 819 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 LBHD1Q9BQE6 289 aaPredicted RBP14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 HERPUD2Q9BSE4 406 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 TMEM8AQ9HCN3 771 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 KCND2Q9NZV8 630 aa14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 NOCTQ9UK39 431 aaKnown RBP14.58□□□□□ -0.07
PRPF40B-209ENST00000548825 MIF4GDA9UHW6 222 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 TLR3O15455 904 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 ITGA8P53708 1063 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 GTF2BQ00403 316 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 CYP24A1Q07973 514 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 KCNT1Q5JUK3 1230 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 FAM71AQ8IYT1 594 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 LRRC34Q8IZ02 419 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 MREGQ8N565 214 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 SLC7A3Q8WY07 619 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 ZWILCHQ9H900 591 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 BAIAP2L1Q9UHR4 511 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 ANAPC5Q9UJX4 755 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 TCF4P15884 667 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 JAK3P52333 1124 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 TMED2Q15363 201 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 NUGGCQ68CJ6 796 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 OR5B17Q8NGF7 314 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 HELQQ8TDG4 1101 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 NSUN6Q8TEA1 469 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 RUBCNQ92622 972 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 ARHGEF2Q92974 986 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 PLVAPQ9BX97 442 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 IMPG2Q9BZV3 1241 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 CDC42EP4Q9H3Q1 356 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 ATP6V0A4Q9HBG4 840 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 SAMD15Q9P1V8 674 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 STK38LQ9Y2H1 464 aa14.58□□□□□ -0.08
PRPF40B-209ENST00000548825 PSAPP07602 524 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 HNRNPH1P31943 449 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 TNFAIP1Q13829 316 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 ZDHHC24Q6UX98 284 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 TRAPPC12Q8WVT3 735 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 CYP26B1Q9NR63 512 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 NCANO14594 1321 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 UBR3Q6ZT12 1888 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 LRRD1A4D1F6 860 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 WDR91A4D1P6 747 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 TTLL13PA6NNM8 815 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 BRD2P25440 801 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 TNFSF9P41273 254 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 RPL7AP62424 266 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 C4orf19Q8IY42 314 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 OLIG1Q8TAK6 271 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 LRRN4Q8WUT4 740 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 XPO6Q96QU8 1125 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 VPS37BQ9H9H4 285 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 PCSK1NQ9UHG2 260 aa14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.57□□□□□ -0.08
PRPF40B-209ENST00000548825 PFASO15067 1338 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 INO80B-WBP1J3KQ70 363 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 BANF1O75531 89 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 EMC2Q15006 297 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 ACAD10Q6JQN1 1059 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 GADL1Q6ZQY3 521 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 TBC1D1Q86TI0 1168 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 CCDC13Q8IYE1 715 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 SHC3Q92529 594 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 ZNF516Q92618 1163 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 GMLQ99445 158 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 INO80BQ9C086 356 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 WNT8AQ9H1J5 351 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 A1CFQ9NQ94 594 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 FGFR1OP2Q9NVK5 253 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 PIM2Q9P1W9 311 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 PTPRJQ12913 1337 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 GAS8O95995 478 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 RDXP35241 583 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 HIRAP54198 1017 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 SP2Q02086 613 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 HIBCHQ6NVY1 386 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 CHMP6Q96FZ7 201 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 XPNPEP1Q9NQW7 623 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 GRHL1Q9NZI5 618 aa14.56□□□□□ -0.08
PRPF40B-209ENST00000548825 GTF3C4Q9UKN8 822 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms