RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 SF3A3Q12874 501 aaKnown RBP eCLIP12.28□□□□□ -0.441e-18■■■■□ 19.6
DDB1-224ENST00000545894 RIPK1Q13546 671 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 MESDQ14696 234 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 CRELD2Q6UXH1 353 aaPredicted RBP12.28□□□□□ -0.44
DDB1-224ENST00000545894 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 RPUSD2Q8IZ73 545 aaKnown RBP12.28□□□□□ -0.44
DDB1-224ENST00000545894 SYCP3Q8IZU3 236 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 HOMER3Q9NSC5 361 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 HOXC10Q9NYD6 342 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 KCND2Q9NZV8 630 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 ADAMTS5Q9UNA0 930 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 PIK3CDO00329 1044 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 SNX3O60493 162 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 PEX10O60683 326 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 RTN2O75298 545 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 PSMD10O75832 226 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 MTA2O94776 668 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 PYGMP11217 842 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 TAL1P17542 331 aaPredicted RBP12.28□□□□□ -0.44
DDB1-224ENST00000545894 CETN1Q12798 172 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 PPP2R5CQ13362 524 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 MYBPC2Q14324 1141 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 FAM133BQ5BKY9 247 aaKnown RBP12.28□□□□□ -0.44
DDB1-224ENST00000545894 TRMT10CQ7L0Y3 403 aaKnown RBP12.28□□□□□ -0.44
DDB1-224ENST00000545894 SLC13A5Q86YT5 568 aaPredicted RBP12.28□□□□□ -0.44
DDB1-224ENST00000545894 DNAJC5GQ8N7S2 189 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 RDH13Q8NBN7 331 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 TCP11Q8WWU5 503 aa12.28□□□□□ -0.44
DDB1-224ENST00000545894 DBR1Q9UK59 544 aaKnown RBP12.28□□□□□ -0.44
DDB1-224ENST00000545894 EMSYQ7Z589 1322 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 ANKRD63C9JTQ0 380 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 VWA5AO00534 786 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 MUTP22033 750 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 CALCOCO2Q13137 446 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 SLC30A10Q6XR72 485 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 TBC1D1Q86TI0 1168 aaPredicted RBP12.27□□□□□ -0.44
DDB1-224ENST00000545894 EXOC3L1Q86VI1 746 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 ARHGEF19Q8IW93 802 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.44
DDB1-224ENST00000545894 CD101Q93033 1021 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 NACC1Q96RE7 527 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 ABCF3Q9NUQ8 709 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 PNMA3Q9UL41 463 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 PTPN22Q9Y2R2 807 aa12.27□□□□□ -0.44
DDB1-224ENST00000545894 MYPNQ86TC9 1320 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 TCRBV7S2A1N4TA0A589 114 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 OAS1P00973 400 aaKnown RBP12.27□□□□□ -0.45
DDB1-224ENST00000545894 CLTAP09496 248 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 CCDC38Q502W7 563 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 ZNF746Q6NUN9 644 aaPredicted RBP12.27□□□□□ -0.45
DDB1-224ENST00000545894 TLDC1Q6P9B6 456 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 INTS8Q75QN2 995 aaKnown RBP12.27□□□□□ -0.45
DDB1-224ENST00000545894 CCDC25Q86WR0 208 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 C12orf50Q8NA57 414 aaPredicted RBP12.27□□□□□ -0.45
DDB1-224ENST00000545894 REPS2Q8NFH8 660 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 SLC5A5Q92911 643 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 RANBP17Q9H2T7 1088 aaKnown RBP12.27□□□□□ -0.45
DDB1-224ENST00000545894 SLC38A10Q9HBR0 1119 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
DDB1-224ENST00000545894 USP15Q9Y4E8 981 aaPredicted RBP12.27□□□□□ -0.45
DDB1-224ENST00000545894 P4HA2O15460 535 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 SPOPO43791 374 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 CNMDO75829 334 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 ECEL1O95672 775 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 RARAP10276 462 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 DLG4P78352 724 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 SIX1Q15475 284 aaPredicted RBP12.26□□□□□ -0.45
DDB1-224ENST00000545894 TAF1CQ15572 869 aaPredicted RBP12.26□□□□□ -0.45
DDB1-224ENST00000545894 ZNF568Q3ZCX4 644 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 CCDC174Q6PII3 467 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 BANK1Q8NDB2 785 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 CCHCR1Q8TD31 782 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 TBC1D31Q96DN5 1066 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 PCDHB18PQ96TA0 734 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 PARK7Q99497 189 aaKnown RBP12.26□□□□□ -0.45
DDB1-224ENST00000545894 STRA6Q9BX79 667 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 TXNRD2Q9NNW7 524 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 BTBD7Q9P203 1132 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 RBPJLQ9UBG7 517 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 AGAP1Q9UPQ3 857 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 GAS7O60861 476 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 ZBED4O75132 1171 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 UBOX5O94941 541 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 GZMAP12544 262 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 ATP5DP30049 168 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 KCNJ1P48048 391 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 VAMP7P51809 220 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 ZNF268Q14587 947 aaPredicted RBP12.26□□□□□ -0.45
DDB1-224ENST00000545894 TMEM132BQ14DG7 1078 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 LONRF1Q17RB8 773 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 EPC2Q52LR7 807 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 RNF207Q6ZRF8 634 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 ARHGEF2Q92974 986 aaKnown RBP12.26□□□□□ -0.45
DDB1-224ENST00000545894 SERPINB12Q96P63 405 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 CDC42EP4Q9H3Q1 356 aaKnown RBP12.26□□□□□ -0.45
DDB1-224ENST00000545894 R3HDMLQ9H3Y0 253 aa12.26□□□□□ -0.45
DDB1-224ENST00000545894 LRRC19Q9H756 370 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms