RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 STIM1Q13586 685 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 MORC3Q14149 939 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 CAMK4Q16566 473 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 XXYLT1Q8NBI6 393 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 GDPD5Q8WTR4 605 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 ZMAT2Q96NC0 199 aaKnown RBP21.12■□□□□ 0.97
DDX55-207ENST00000540763 CXCL16Q9H2A7 254 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 FAN1Q9Y2M0 1017 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 C2CD2Q9Y426 696 aa21.12■□□□□ 0.97
DDX55-207ENST00000540763 LACTBL1A8MY62 500 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 NRP1O14786 923 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 ITGB1P05556 798 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 CYP3A5P20815 502 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 PRCPP42785 496 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 KRT17Q04695 432 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 PTPROQ16827 1216 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 EDRF1Q3B7T1 1238 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 ZCWPW2Q504Y3 356 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 GLRA4Q5JXX5 417 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 SMYD4Q8IYR2 804 aaPredicted RBP21.11■□□□□ 0.97
DDX55-207ENST00000540763 SAAL1Q96ER3 474 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 TMEM169Q96HH4 297 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 IGSF21Q96ID5 467 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 PCIF1Q9H4Z3 704 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 DMAC2Q9NW81 257 aa21.11■□□□□ 0.97
DDX55-207ENST00000540763 RBAKQ9NYW8 714 aaPredicted RBP21.11■□□□□ 0.97
DDX55-207ENST00000540763 UBQLN1Q9UMX0 589 aaKnown RBP21.11■□□□□ 0.97
DDX55-207ENST00000540763 ZNF233A6NK53 670 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 TMEM189-UBE2V1I3L0A0 370 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 OR1G1P47890 313 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 SURF1Q15526 300 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 ZBTB6Q15916 424 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 FOXR2Q6PJQ5 311 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 ADSSL1Q8N142 457 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 SPPL3Q8TCT6 385 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 DDX27Q96GQ7 796 aaKnown RBP21.1■□□□□ 0.97
DDX55-207ENST00000540763 COLEC11Q9BWP8 271 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 MAPK8IP1Q9UQF2 711 aa21.1■□□□□ 0.97
DDX55-207ENST00000540763 TRANK1O15050 2925 aa21.09■□□□□ 0.97
DDX55-207ENST00000540763 PSMA7O14818 248 aa21.09■□□□□ 0.97
DDX55-207ENST00000540763 CLIC2O15247 247 aa21.09■□□□□ 0.97
DDX55-207ENST00000540763 NR3C1P04150 777 aa21.09■□□□□ 0.97
DDX55-207ENST00000540763 RPL13P26373 211 aaKnown RBP21.09■□□□□ 0.97
DDX55-207ENST00000540763 PBX3P40426 434 aa21.09■□□□□ 0.97
DDX55-207ENST00000540763 SNRNP35Q16560 246 aaKnown RBP21.09■□□□□ 0.97
DDX55-207ENST00000540763 CENPPQ6IPU0 288 aa21.09■□□□□ 0.97
DDX55-207ENST00000540763 PDE12Q6L8Q7 609 aaKnown RBP21.09■□□□□ 0.97
DDX55-207ENST00000540763 DDX53Q86TM3 631 aaKnown RBP21.09■□□□□ 0.97
DDX55-207ENST00000540763 MRPL38Q96DV4 380 aaKnown RBP21.09■□□□□ 0.97
DDX55-207ENST00000540763 KIF12Q96FN5 646 aa21.09■□□□□ 0.97
DDX55-207ENST00000540763 DHTKD1Q96HY7 919 aaPredicted RBP21.09■□□□□ 0.97
DDX55-207ENST00000540763 MARCH5Q9NX47 278 aa21.09■□□□□ 0.97
DDX55-207ENST00000540763 PUF60Q9UHX1 559 aaKnown RBP21.09■□□□□ 0.97
DDX55-207ENST00000540763 GOLGA8IPA6NC78 632 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 GOLGA8JA6NMD2 632 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 MAPK13O15264 365 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 GRM6O15303 877 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 BMP6P22004 513 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 LRPAP1P30533 357 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 RPL9P32969 192 aaKnown RBP21.08■□□□□ 0.97
DDX55-207ENST00000540763 CYP2J2P51589 502 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 LRRC63Q05C16 580 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 TMEM132DQ14C87 1099 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 JADE1Q6IE81 842 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 RBM43Q6ZSC3 357 aaKnown RBP21.08■□□□□ 0.97
DDX55-207ENST00000540763 ZSWIM2Q8NEG5 633 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 POF1BQ8WVV4 589 aa21.08■□□□□ 0.97
DDX55-207ENST00000540763 CASTOR2A6NHX0 329 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 NT5C1B-RDH14C9J2C7 533 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 RFXAPO00287 272 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 EXOC3O60645 756 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 EFEMP2O95967 443 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 SOX4Q06945 474 aaPredicted RBP21.07■□□□□ 0.96
DDX55-207ENST00000540763 ADGRE1Q14246 886 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 UPP1Q16831 310 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 SPATA1Q5VX52 437 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 TMEM173Q86WV6 379 aaPredicted RBP21.07■□□□□ 0.96
DDX55-207ENST00000540763 CBWD2Q8IUF1 395 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 RNF168Q8IYW5 571 aaPredicted RBP21.07■□□□□ 0.96
DDX55-207ENST00000540763 BEST2Q8NFU1 509 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 FAM212AQ96EL1 285 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 TSG101Q99816 390 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 ALG13Q9NP73 1137 aaKnown RBP21.07■□□□□ 0.96
DDX55-207ENST00000540763 TLR9Q9NR96 1032 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 ADAM28Q9UKQ2 775 aa21.07■□□□□ 0.96
DDX55-207ENST00000540763 PRG3Q9Y2Y8 225 aaPredicted RBP21.07■□□□□ 0.96
DDX55-207ENST00000540763 VWA8A3KMH1 1905 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 BIN1O00499 593 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 NFICP08651 508 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 NR2F2P24468 414 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 CCNE1P24864 410 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 ENPEPQ07075 957 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 PSMD6Q15008 389 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 TIGD5Q53EQ6 642 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 DCLRE1AQ6PJP8 1040 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 ZC3H3Q8IXZ2 948 aaKnown RBP21.06■□□□□ 0.96
DDX55-207ENST00000540763 BCL7CQ8WUZ0 217 aaPredicted RBP21.06■□□□□ 0.96
DDX55-207ENST00000540763 C18orf25Q96B23 403 aaPredicted RBP21.06■□□□□ 0.96
DDX55-207ENST00000540763 MFSD14AQ96MC6 490 aa21.06■□□□□ 0.96
DDX55-207ENST00000540763 FRMD4BQ9Y2L6 1034 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms