RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 DENND4AQ7Z401 1863 aa18.79■□□□□ 0.6
SFSWAP-205ENST00000537164 A0A0B4J269 797 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 TTC26A0AVF1 554 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 C2CD2LO14523 706 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 CLTAP09496 248 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 SSTR3P32745 418 aaPredicted RBP18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 RTP2Q5QGT7 225 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 CES5AQ6NT32 575 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 SLC39A4Q6P5W5 647 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 SFR1Q86XK3 245 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 HDAC7Q8WUI4 952 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 PIK3R5Q8WYR1 880 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 DDX27Q96GQ7 796 aaKnown RBP18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 FBXL18Q96ME1 805 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 NECTIN4Q96NY8 510 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 TTPALQ9BTX7 342 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 PANK2Q9BZ23 570 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 TNMDQ9H2S6 317 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 ZHX3Q9H4I2 956 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 KBTBD4Q9NVX7 518 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 RCOR1Q9UKL0 485 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 STYXL1Q9Y6J8 313 aa18.78■□□□□ 0.6
SFSWAP-205ENST00000537164 ANK1P16157 1881 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 C2orf16Q68DN1 1984 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 OGTO15294 1046 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 ZC2HC1CQ53FD0 456 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 CNNM4Q6P4Q7 775 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 LILRA6Q6PI73 481 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 PDILTQ8N807 584 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 C3orf58Q8NDZ4 430 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 HASPINQ8TF76 798 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 RIN2Q8WYP3 895 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 B3GALT6Q96L58 329 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 TSPAN18Q96SJ8 248 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 RHOBTB2Q9BYZ6 727 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 SFXN1Q9H9B4 322 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 GOLGA2P5Q9HBQ8 144 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 DPP7Q9UHL4 492 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 ZDHHC9Q9Y397 364 aa18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-205ENST00000537164 B3GAT3O94766 335 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 HARSP12081 509 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 FGFR3P22607 806 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 IGFBP6P24592 240 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 RPL9P32969 192 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 MTHFRP42898 656 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 DNM1Q05193 864 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 ZBTB6Q15916 424 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 SEZ6Q53EL9 994 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 FAM171A1Q5VUB5 890 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 PDXDC1Q6P996 788 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 C15orf39Q6ZRI6 1047 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 CMASQ8NFW8 434 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 LNX1Q8TBB1 728 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 C1QTNF1Q9BXJ1 281 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 LRRC27Q9C0I9 530 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 EPHX3Q9H6B9 360 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 PCDHA7Q9UN72 937 aa18.76■□□□□ 0.59
SFSWAP-205ENST00000537164 TCHHQ07283 1943 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 TRAPPC3O43617 180 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 GLUD1P00367 558 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 CXCL8P10145 99 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 TNFSF9P41273 254 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 MATR3P43243 847 aaKnown RBP eCLIP18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 POU5F1Q01860 360 aaKnown RBP18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 ALCAMQ13740 583 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 FOXD4L6Q3SYB3 417 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 RESP18Q5W5W9 173 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 SLFN12LQ6IEE8 588 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 FOXD4L3Q6VB84 417 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 GPR149Q86SP6 731 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 IQUBQ8NA54 791 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 RIPOR3Q96MK2 946 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 APOL5Q9BWW9 433 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 PLEKHA4Q9H4M7 779 aa18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 MRPL44Q9H9J2 332 aaKnown RBP18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 CPSF3Q9UKF6 684 aaKnown RBP18.75■□□□□ 0.59
SFSWAP-205ENST00000537164 ANKRD63C9JTQ0 380 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 PODXLO00592 558 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 ALADP13716 330 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 CYP3A5P20815 502 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 ME1P48163 572 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 ENOX2Q16206 610 aaKnown RBP18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 HERC4Q5GLZ8 1057 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 RARS2Q5T160 578 aaKnown RBP18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 L1TD1Q5T7N2 865 aaKnown RBP18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 ELMSAN1Q6PJG2 1045 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 PRSS55Q6UWB4 352 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 CYP26C1Q6V0L0 522 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 CD302Q8IX05 232 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 C12orf76Q8N812 135 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 C18orf25Q96B23 403 aaPredicted RBP18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 CLSTN3Q9BQT9 956 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 MSTO1Q9BUK6 570 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 TRIM9Q9C026 710 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 POMKQ9H5K3 350 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 MAGEF1Q9HAY2 307 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 MAN1C1Q9NR34 630 aa18.74■□□□□ 0.59
SFSWAP-205ENST00000537164 PANK4Q9NVE7 773 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms