RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 CATSPER3Q86XQ3 398 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 ZBTB8OSQ8IWT0 167 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 NELL1Q92832 810 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 CCDC113Q9H0I3 377 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 GOLGA2P5Q9HBQ8 144 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 PCDHGA2Q9Y5H1 932 aa23.24■■□□□ 1.31
CHKA-206ENST00000531341 BTBD18B2RXH4 712 aa23.23■■□□□ 1.31
CHKA-206ENST00000531341 I3L4J1 428 aa23.23■■□□□ 1.31
CHKA-206ENST00000531341 NEMFO60524 1076 aa23.23■■□□□ 1.31
CHKA-206ENST00000531341 LILRB5O75023 590 aa23.23■■□□□ 1.31
CHKA-206ENST00000531341 PRKCBP05771 671 aa23.23■■□□□ 1.31
CHKA-206ENST00000531341 TKTP29401 623 aaKnown RBP23.23■■□□□ 1.31
CHKA-206ENST00000531341 ATXN1P54253 815 aaKnown RBP23.23■■□□□ 1.31
CHKA-206ENST00000531341 ELAVL2Q12926 359 aaKnown RBP23.23■■□□□ 1.31
CHKA-206ENST00000531341 C3orf58Q8NDZ4 430 aa23.23■■□□□ 1.31
CHKA-206ENST00000531341 ATRIPQ8WXE1 791 aa23.23■■□□□ 1.31
CHKA-206ENST00000531341 MRPS23Q9Y3D9 190 aaKnown RBP23.23■■□□□ 1.31
CHKA-206ENST00000531341 B3GAT3O94766 335 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 RHOP08100 348 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 CEBPBP17676 345 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 TGM1P22735 817 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 BRCC3P46736 316 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 TMEM132AQ24JP5 1023 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 PDXDC1Q6P996 788 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 NECAB1Q8N987 351 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 DDX27Q96GQ7 796 aaKnown RBP23.22■■□□□ 1.31
CHKA-206ENST00000531341 PPP1R10Q96QC0 940 aaKnown RBP23.22■■□□□ 1.31
CHKA-206ENST00000531341 KIFC3Q9BVG8 833 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 ZSCAN32Q9NX65 697 aa23.22■■□□□ 1.31
CHKA-206ENST00000531341 ACKR2O00590 384 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 ECI2O75521 394 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 KRT37O76014 449 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 FOSBP53539 338 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 MAPK6Q16659 721 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 ZNF687Q8N1G0 1237 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 MCPH1Q8NEM0 835 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 TCEAL4Q96EI5 215 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 EPC1Q9H2F5 836 aa23.21■■□□□ 1.31
CHKA-206ENST00000531341 SMG5Q9UPR3 1016 aaKnown RBP23.21■■□□□ 1.31
CHKA-206ENST00000531341 TMEM189-UBE2V1I3L0A0 370 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 LARGE1O95461 756 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 FCARP24071 287 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 MTAPQ13126 283 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 UPP1Q16831 310 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 NT5DC1Q5TFE4 455 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 ZNF852Q6ZMS4 543 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 C2orf40Q9H1Z8 148 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 PRMT8Q9NR22 394 aaPredicted RBP23.2■■□□□ 1.3
CHKA-206ENST00000531341 BACE2Q9Y5Z0 518 aa23.2■■□□□ 1.3
CHKA-206ENST00000531341 MAGEA9P43362 315 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 RPS9P46781 194 aaKnown RBP23.19■■□□□ 1.3
CHKA-206ENST00000531341 SOX4Q06945 474 aaPredicted RBP23.19■■□□□ 1.3
CHKA-206ENST00000531341 GRM2Q14416 872 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 PADI6Q6TGC4 694 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 DIS3L2Q8IYB7 885 aaKnown RBP23.19■■□□□ 1.3
CHKA-206ENST00000531341 WASF1Q92558 559 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 BORCS6Q96GS4 357 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 NELL2Q99435 816 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 ADPGKQ9BRR6 497 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 PARD6AQ9NPB6 346 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 GDE1Q9NZC3 331 aa23.19■■□□□ 1.3
CHKA-206ENST00000531341 PTPN2P17706 415 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 CYP11B2P19099 503 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 RBM25P49756 843 aaKnown RBP23.18■■□□□ 1.3
CHKA-206ENST00000531341 ROR1Q01973 937 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 PRSS36Q5K4E3 855 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 CEP120Q8N960 986 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 ELSPBP1Q96BH3 223 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 NACC1Q96RE7 527 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 BRMS1Q9HCU9 246 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 TUFT1Q9NNX1 390 aa23.18■■□□□ 1.3
CHKA-206ENST00000531341 KMT2BQ9UMN6 2715 aaPredicted RBP23.18■■□□□ 1.3
CHKA-206ENST00000531341 ARHGEF37A1IGU5 675 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 WDR27A2RRH5 827 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 TDGF1P13385 188 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 CCR2P41597 374 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 NAMPTP43490 491 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 ADCY1Q08828 1119 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 ANKS3Q6ZW76 656 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 RTL10Q7L3V2 364 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 DEPTORQ8TB45 409 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 AVENQ9NQS1 362 aaPredicted RBP23.17■■□□□ 1.3
CHKA-206ENST00000531341 NDRG2Q9UN36 371 aaKnown RBP23.17■■□□□ 1.3
CHKA-206ENST00000531341 EPG5Q9HCE0 2579 aa23.17■■□□□ 1.3
CHKA-206ENST00000531341 SMIM28A0A1B0GU29 152 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 DCDC2BA2VCK2 349 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 NCAM2O15394 837 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 JAK2O60674 1132 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 ABLIM3O94929 683 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 SEC24AO95486 1093 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 MCM7P33993 719 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 ECM1Q16610 540 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 ME3Q16798 604 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 DCAF4L1Q3SXM0 396 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 FAM78AQ5JUQ0 283 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 SLC8B1Q6J4K2 584 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 NSUN7Q8NE18 718 aaKnown RBP23.16■■□□□ 1.3
CHKA-206ENST00000531341 ZNF461Q8TAF7 563 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 ZSWIM3Q96MP5 696 aa23.16■■□□□ 1.3
CHKA-206ENST00000531341 CORO1BQ9BR76 489 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms