RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	TMEM140	Q9NV12	185 aa		5.81	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CALCOCO1	Q9P1Z2	691 aa		5.81	□□□□□ -1.48
CTNNA1-222	ENST00000520400	ZFR2	Q9UPR6	939 aa	Known RBP	5.81	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PCDHA1	Q9Y5I3	950 aa		5.81	□□□□□ -1.48
CTNNA1-222	ENST00000520400	ZNF536	O15090	1300 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	USP19	O94966	1318 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CCDC78	A2IDD5	438 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	SLC16A6	O15403	523 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CAND2	O75155	1236 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	RAD17	O75943	681 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	HRG	P04196	525 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	IL2RB	P14784	551 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	RAP2B	P61225	183 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	COBLL1	Q53SF7	1204 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	DACT2	Q5SW24	774 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	UBXN11	Q5T124	520 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	METRNL	Q641Q3	311 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	IL31	Q6EBC2	164 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	GADL1	Q6ZQY3	521 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	DNER	Q8NFT8	737 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	MRGPRX1	Q96LB2	322 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	NEU1	Q99519	415 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	NELFA	Q9H3P2	528 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	KMT5A	Q9NQR1	393 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PNPO	Q9NVS9	261 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	VSX1	Q9NZR4	365 aa	Predicted RBP	5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	POLH	Q9Y253	713 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	SLC30A1	Q9Y6M5	507 aa		5.8	□□□□□ -1.48
CTNNA1-222	ENST00000520400	NPEPPSL1	A6NEC2	478 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	TBKBP1	A7MCY6	615 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PATE3	B3GLJ2	98 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	FAM227A	F5H4B4	570 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400		H3BUI4	141 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PMM2	O15305	246 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	MATN4	O95460	622 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	NPR1	P16066	1061 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	HDC	P19113	662 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PHKA1	P46020	1223 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	NEK3	P51956	506 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	RABGGTB	P53611	331 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PURA	Q00577	322 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	SEMA5A	Q13591	1074 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	SURF1	Q15526	300 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	ELAVL1	Q15717	326 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	BMT2	Q1RMZ1	405 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	SYCP2L	Q5T4T6	812 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	ZNF529	Q6P280	563 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CCDC149	Q6ZUS6	474 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	MB21D1	Q8N884	522 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PJA1	Q8NG27	643 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	OR52N2	Q8NGI0	321 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400		Q8TCH9	128 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CDK5RAP3	Q96JB5	506 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	NAA15	Q9BXJ9	866 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	MRPL46	Q9H2W6	279 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CD248	Q9HCU0	757 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	MAN1C1	Q9NR34	630 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	MRPS18A	Q9NVS2	196 aa	Known RBP	5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PCDHA6	Q9UN73	950 aa		5.79	□□□□□ -1.48
CTNNA1-222	ENST00000520400	KIAA0391	O15091	583 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	KRT18	P05783	430 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	ATP5J	P18859	108 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	HK1	P19367	917 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	RPS19	P39019	145 aa	Known RBP	5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	KIAA0753	Q2KHM9	967 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	GJC2	Q5T442	439 aa	Predicted RBP	5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400		Q6ZRM9	215 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	PDZD4	Q76G19	769 aa	Predicted RBP	5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	DOK3	Q7L591	496 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	MAEA	Q7L5Y9	396 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	SRGAP1	Q7Z6B7	1085 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	DAAM2	Q86T65	1068 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	IL31RA	Q8NI17	732 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	ARL8A	Q96BM9	186 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	TEPSIN	Q96N21	525 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CPA4	Q9UI42	421 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	JAG2	Q9Y219	1238 aa		5.78	□□□□□ -1.48
CTNNA1-222	ENST00000520400	CAPN8	A6NHC0	703 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	LEFTY2	O00292	366 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	ITGB3	P05106	788 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	MYL1	P05976	194 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	MYL3	P08590	195 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	KIT	P10721	976 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	CLRN1	P58418	232 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	EXOSC9	Q06265	439 aa	Known RBP	5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	CCDC157	Q569K6	752 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	THEMIS2	Q5TEJ8	643 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	RNF220	Q5VTB9	566 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	D2HGDH	Q8N465	521 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	IL17RD	Q8NFM7	739 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	MDGA1	Q8NFP4	955 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	PARD3B	Q8TEW8	1205 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	EPC1	Q9H2F5	836 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	FAM204A	Q9H8W3	233 aa		5.77	□□□□□ -1.49
CTNNA1-222	ENST00000520400	MOCS1	Q9NZB8	636 aa		5.77	□□□□□ -1.49

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