RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FAM187AA6NFU0 413 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 SART1O43290 800 aaKnown RBP19.65■□□□□ 0.74
SDC2-202ENST00000518385 ARIH2O95376 493 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 ACTN1P12814 892 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 HSPA6P17066 643 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 CNGA1P29973 690 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 CACNA2D3Q8IZS8 1091 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 KDM4CQ9H3R0 1056 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 KLC4Q9NSK0 619 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.65■□□□□ 0.74
SDC2-202ENST00000518385 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
SDC2-202ENST00000518385 TELO2Q9Y4R8 837 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 DOCK5Q9H7D0 1870 aa19.65■□□□□ 0.74
SDC2-202ENST00000518385 GSTTP1A0A1W2PQM5 241 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 KIF1CO43896 1103 aaKnown RBP19.64■□□□□ 0.73
SDC2-202ENST00000518385 SNAI1O95863 264 aaPredicted RBP19.64■□□□□ 0.73
SDC2-202ENST00000518385 HOXC6P09630 235 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 H2AFZP0C0S5 128 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 ECHS1P30084 290 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 POLGP54098 1239 aaPredicted RBP19.64■□□□□ 0.73
SDC2-202ENST00000518385 ZNF844Q08AG5 666 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 EMC2Q15006 297 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 TAPT1Q6NXT6 567 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 H2AFVQ71UI9 128 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 TPCN2Q8NHX9 752 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 TMC2Q8TDI7 906 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 FBXL18Q96ME1 805 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 SH2D3AQ9BRG2 576 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 CBWD1Q9BRT8 395 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 TINF2Q9BSI4 451 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 KATNBL1Q9H079 304 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 KIAA1586Q9HCI6 787 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 PDGFCQ9NRA1 345 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 ARHGAP28Q9P2N2 729 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 APEX2Q9UBZ4 518 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 ADAMTS1Q9UHI8 967 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 NAGPAQ9UK23 515 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 STXBP5LQ9Y2K9 1186 aa19.64■□□□□ 0.73
SDC2-202ENST00000518385 UTP11Q9Y3A2 253 aaKnown RBP19.64■□□□□ 0.73
SDC2-202ENST00000518385 DOCK3Q8IZD9 2030 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 SORBS3O60504 671 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 GGPS1O95749 300 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 GSTA1P08263 222 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 ATP4AP20648 1035 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 SLC8A1P32418 973 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 GTF2H1P32780 548 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 STAT5BP51692 787 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 DRG2P55039 364 aaKnown RBP19.63■□□□□ 0.73
SDC2-202ENST00000518385 SP4Q02446 784 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 TTLL4Q14679 1199 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 PREPLQ4J6C6 727 aaPredicted RBP19.63■□□□□ 0.73
SDC2-202ENST00000518385 CELF3Q5SZQ8 465 aaKnown RBP19.63■□□□□ 0.73
SDC2-202ENST00000518385 RNF187Q5TA31 235 aaPredicted RBP19.63■□□□□ 0.73
SDC2-202ENST00000518385 GKAP1Q5VSY0 366 aaPredicted RBP19.63■□□□□ 0.73
SDC2-202ENST00000518385 CCDC13Q8IYE1 715 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 SLC7A3Q8WY07 619 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 INTS2Q9H0H0 1204 aaKnown RBP19.63■□□□□ 0.73
SDC2-202ENST00000518385 STMN4Q9H169 189 aaPredicted RBP19.63■□□□□ 0.73
SDC2-202ENST00000518385 POLR3FQ9H1D9 316 aaPredicted RBP19.63■□□□□ 0.73
SDC2-202ENST00000518385 GJD2Q9UKL4 321 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 NCANO14594 1321 aa19.63■□□□□ 0.73
SDC2-202ENST00000518385 GAS2O43903 313 aaKnown RBP19.62■□□□□ 0.73
SDC2-202ENST00000518385 CEP104O60308 925 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 DNAJC8O75937 253 aaPredicted RBP19.62■□□□□ 0.73
SDC2-202ENST00000518385 TXNP10599 105 aaKnown RBP19.62■□□□□ 0.73
SDC2-202ENST00000518385 NAMPTP43490 491 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 LMNB2Q03252 620 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 TARBP2Q15633 366 aaKnown RBP19.62■□□□□ 0.73
SDC2-202ENST00000518385 SKIDA1Q1XH10 827 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 MTERF2Q49AM1 385 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 CBWD6Q4V339 395 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 CBWD3Q5JTY5 395 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 CBWD5Q5RIA9 395 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 ALKBH5Q6P6C2 394 aaKnown RBP19.62■□□□□ 0.73
SDC2-202ENST00000518385 PEX26Q7Z412 305 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 BSNDQ8WZ55 320 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 ZBTB9Q96C00 473 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 RUNDC3BQ96NL0 473 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 PCIF1Q9H4Z3 704 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 AZI2Q9H6S1 392 aa19.62■□□□□ 0.73
SDC2-202ENST00000518385 NOC2LQ9Y3T9 749 aaKnown RBP19.62■□□□□ 0.73
SDC2-202ENST00000518385 GOLGA6L10A0A0M3HER8 536 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 KRIT1O00522 736 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 PPFIA2O75334 1257 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 LGR5O75473 907 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 SOX5P35711 763 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 ARL2P36404 184 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 SLC26A2P50443 739 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 DHX34Q14147 1143 aaKnown RBP19.61■□□□□ 0.73
SDC2-202ENST00000518385 WLSQ5T9L3 541 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 TTC19Q6DKK2 380 aaPredicted RBP19.61■□□□□ 0.73
SDC2-202ENST00000518385 PLPPR4Q7Z2D5 763 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 KLHL7Q8IXQ5 586 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 TATDN2Q93075 761 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 CCDC114Q96M63 670 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 MFSD14AQ96MC6 490 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 PARP2Q9UGN5 583 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 DNAJC12Q9UKB3 198 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 EMSYQ7Z589 1322 aa19.61■□□□□ 0.73
SDC2-202ENST00000518385 ESYT3A0FGR9 886 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms