RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RASAL2Q9UJF2 1139 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 DSEQ9UL01 958 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 KCNH3Q9ULD8 1083 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 USP18Q9UMW8 372 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF281Q9Y2X9 895 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 SNX8Q9Y5X2 465 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 IRS2Q9Y4H2 1338 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 UBA6A0AVT1 1052 aaPredicted RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 C7orf72A4D263 438 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADARB2-AS1A8MUL3 147 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 H0Y3Z8 333 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 H7BY64 318 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 GTPBP1O00178 669 aaKnown RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 FCHO1O14526 889 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 FOXP2O15409 715 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 TMEM63AO94886 807 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 GOSR1O95249 250 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC4A1P02730 911 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 MT-ND5P03915 603 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 A1BGP04217 495 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 THEGLP0DJG4 465 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 ACADMP11310 421 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 DRD2P14416 443 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 KCNA2P16389 499 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 EN2P19622 333 aaPredicted RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 IL11P20809 199 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 CYP7A1P22680 504 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 ATP5F1P24539 256 aaPredicted RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 ATP5DP30049 168 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 CD68P34810 354 aaPredicted RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 PHKA1P46020 1223 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 FNTBP49356 437 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 POLE2P56282 527 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 ACTR2P61160 394 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 MRPS35P82673 323 aaKnown RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 MC1RQ01726 317 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 PTSQ03393 145 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 UBXN1Q04323 297 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 AP1B1Q10567 949 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 VWA3BQ502W6 1294 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 FIGNQ5HY92 759 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 C1orf141Q5JVX7 400 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 NUTM2GQ5VZR2 741 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 GPR139Q6DWJ6 353 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 NFRKBQ6P4R8 1299 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 SHQ1Q6PI26 577 aaKnown RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 UNQ6494/PRO21346Q6UXR6 183 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 USP49Q70CQ1 688 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 RAPH1Q70E73 1250 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 UNC13DQ70J99 1090 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 TSPYL5Q86VY4 417 aaPredicted RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 RAB11FIP4Q86YS3 637 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 TRIML1Q8N9V2 468 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 KCTD6Q8NC69 237 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 OR2I1PQ8NGU4 316 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 OR14C36Q8NHC7 312 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 PIP4K2CQ8TBX8 421 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 CREB3L4Q8TEY5 395 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 UBASH3BQ8TF42 649 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 TBC1D22AQ8WUA7 517 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 CUL5Q93034 780 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF837Q96EG3 531 aaPredicted RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 RNF125Q96EQ8 232 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 MAML3Q96JK9 1138 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 FAM167AQ96KS9 214 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 P2RX7Q99572 595 aaKnown RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 GDF15Q99988 308 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 C7orf25Q9BPX7 421 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 DEF6Q9H4E7 631 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 SYNCQ9H7C4 482 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 RC3H2Q9HBD1 1191 aaKnown RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 MKNK2Q9HBH9 465 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 INCENPQ9NQS7 918 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 EPS15L1Q9UBC2 864 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 EIF2B4Q9UI10 523 aaKnown RBP4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRSS50Q9UI38 385 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 GTF3C4Q9UKN8 822 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 BLOC1S6Q9UL45 172 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 TMEM5Q9Y2B1 443 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 CYP46A1Q9Y6A2 500 aa4.39□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLC35F4A4IF30 521 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 NT5C1B-RDH14C9J2C7 533 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 PTGES3LE9PB15 166 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 INO80B-WBP1J3KQ70 363 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TM4SF5O14894 197 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TBC1D4O60343 1298 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 NPHS1O60500 1241 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 BUB1BO60566 1050 aaPredicted RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ERAL1O75616 437 aaKnown RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 TSPAN9O75954 239 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 USP1O94782 785 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ACTL6BO94805 426 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 PCDH8O95206 1070 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 CBX7O95931 251 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 CHGBP05060 677 aa4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 HSPA1AP0DMV8 641 aaKnown RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 HSPA1BP0DMV9 641 aaKnown RBP4.38□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADH5P11766 374 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms