RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 P2RX7Q99572 595 aaKnown RBP8.99□□□□□ -0.97
NUP54-215ENST00000514313 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.99□□□□□ -0.97
NUP54-215ENST00000514313 ADAM7Q9H2U9 754 aa8.99□□□□□ -0.97
NUP54-215ENST00000514313 PCDHGB2Q9Y5G2 931 aa8.99□□□□□ -0.97
NUP54-215ENST00000514313 LOC100996750A0A140TA64 210 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 IL18RAPO95256 599 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 VSIG10L2P0DP72 767 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 IL2RBP14784 551 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 ALOX15P16050 662 aaPredicted RBP8.98□□□□□ -0.97
NUP54-215ENST00000514313 SOX8P57073 446 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 ADAM8P78325 824 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 ATP2C1P98194 919 aaPredicted RBP8.98□□□□□ -0.97
NUP54-215ENST00000514313 SP140Q13342 867 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 USP10Q14694 798 aaKnown RBP8.98□□□□□ -0.97
NUP54-215ENST00000514313 TBR1Q16650 682 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 VWA3BQ502W6 1294 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 HIBCHQ6NVY1 386 aaPredicted RBP8.98□□□□□ -0.97
NUP54-215ENST00000514313 PLXDC1Q8IUK5 500 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 FBXO15Q8NCQ5 510 aaPredicted RBP8.98□□□□□ -0.97
NUP54-215ENST00000514313 ZC3H10Q96K80 434 aaKnown RBP8.98□□□□□ -0.97
NUP54-215ENST00000514313 CDC5LQ99459 802 aaKnown RBP8.98□□□□□ -0.97
NUP54-215ENST00000514313 KRTAP4-6Q9BYQ5 205 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 TRIM54Q9BYV2 358 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 LUZP4Q9P127 313 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 IRAK3Q9Y616 596 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 ATRNL1Q5VV63 1379 aa8.98□□□□□ -0.97
NUP54-215ENST00000514313 PARP1P09874 1014 aaKnown RBP8.97□□□□□ -0.97
NUP54-215ENST00000514313 SBK3P0C264 359 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 HDCP19113 662 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 CASRP41180 1078 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 PIK3CGP48736 1102 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 EXOSC9Q06265 439 aaKnown RBP8.97□□□□□ -0.97
NUP54-215ENST00000514313 KLHDC7AQ5VTJ3 777 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 AFMIDQ63HM1 303 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 KRT40Q6A162 431 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 SAPCD2Q86UD0 394 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 NKAPQ8N5F7 415 aaKnown RBP8.97□□□□□ -0.97
NUP54-215ENST00000514313 ANKRD53Q8N9V6 530 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 OR14K1Q8NGZ2 314 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 TNPO1Q92973 898 aaKnown RBP8.97□□□□□ -0.97
NUP54-215ENST00000514313 CEP95Q96GE4 821 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 MSLNLQ96KJ4 702 aa8.97□□□□□ -0.97
NUP54-215ENST00000514313 C11orf54Q9H0W9 315 aaPredicted RBP8.97□□□□□ -0.97
NUP54-215ENST00000514313 NRP1O14786 923 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 MATN4O95460 622 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 JUNP05412 331 aaKnown RBP8.96□□□□□ -0.98
NUP54-215ENST00000514313 FLT3LGP49771 235 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 ADCY7P51828 1080 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 ARFIP2P53365 341 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 CCDC174Q6PII3 467 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 OR10H5Q8NGA6 315 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 MAML1Q92585 1016 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 SUCLG2Q96I99 432 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 TMEM168Q9H0V1 697 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 SLC6A15Q9H2J7 730 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 SLAMF7Q9NQ25 335 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 SACM1LQ9NTJ5 587 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 MOCS1Q9NZB8 636 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 NTMQ9P121 344 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 COL20A1Q9P218 1284 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 AFF4Q9UHB7 1163 aaKnown RBP8.96□□□□□ -0.98
NUP54-215ENST00000514313 ADAM29Q9UKF5 820 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 ZMYM3Q14202 1370 aa8.96□□□□□ -0.98
NUP54-215ENST00000514313 A0A087WV62 115 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 APOL1O14791 398 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 GRM6O15303 877 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 TEX33O43247 280 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 FGF18O76093 207 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 CYP1A1P04798 512 aaPredicted RBP8.95□□□□□ -0.98
NUP54-215ENST00000514313 RAP2AP10114 183 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 PI3P19957 117 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 MAPK10P53779 464 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 HGFACQ04756 655 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 SSPNQ14714 243 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 C3orf38Q5JPI3 329 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 MFSD14BQ5SR56 506 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 CNKSR3Q6P9H4 555 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 USP30Q70CQ3 517 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 PDZD4Q76G19 769 aaPredicted RBP8.95□□□□□ -0.98
NUP54-215ENST00000514313 KBTBD7Q8WVZ9 684 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 KCNN1Q92952 543 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 RPL10LQ96L21 214 aaKnown RBP8.95□□□□□ -0.98
NUP54-215ENST00000514313 PWWP2AQ96N64 755 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 MYOCQ99972 504 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 KCNH6Q9H252 994 aa8.95□□□□□ -0.98
NUP54-215ENST00000514313 SIDT1Q9NXL6 827 aaKnown RBP8.95□□□□□ -0.98
NUP54-215ENST00000514313 HARSP12081 509 aaKnown RBP8.94□□□□□ -0.98
NUP54-215ENST00000514313 CHKAP35790 457 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 GAGE13Q4V321 117 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 ZMAT1Q5H9K5 638 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 EMC10Q5UCC4 262 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 MCTP2Q6DN12 878 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 KLHL36Q8N4N3 616 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 OR5M3Q8NGP4 307 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 ZSCAN18Q8TBC5 510 aaPredicted RBP8.94□□□□□ -0.98
NUP54-215ENST00000514313 BRI3BPQ8WY22 251 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 COLEC11Q9BWP8 271 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 ENKD1Q9H0I2 346 aa8.94□□□□□ -0.98
NUP54-215ENST00000514313 BARX1Q9HBU1 254 aaPredicted RBP8.94□□□□□ -0.98
NUP54-215ENST00000514313 NCDNQ9UBB6 729 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms