RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 OR2I1PQ8NGU4 316 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 PIWIL2Q8TC59 973 aaKnown RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 SPPL3Q8TCT6 385 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 CCHCR1Q8TD31 782 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 KCNG4Q8TDN1 519 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 CSGALNACT1Q8TDX6 532 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 IPCEF1Q8WWN9 437 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 SYTL4Q96C24 671 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 CALML4Q96GE6 196 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 MSLNLQ96KJ4 702 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 ASB2Q96Q27 587 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 UHRF1Q96T88 793 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 MRPL9Q9BYD2 267 aaKnown RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 GPR62Q9BZJ7 368 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 PDGFDQ9GZP0 370 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 BRD8Q9H0E9 1235 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 MTG2Q9H4K7 406 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 RBM12Q9NTZ6 932 aaKnown RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 ARGLU1Q9NWB6 273 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 UCKL1Q9NWZ5 548 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 CEP72Q9P209 647 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 COL20A1Q9P218 1284 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 SRRDQ9UH36 339 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 TMPRSS11EQ9UL52 423 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 PCDHB6Q9Y5E3 794 aa4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 RSF1Q96T23 1441 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P22-201ENST00000505315 SETD1BQ9UPS6 1966 aaKnown RBP4.09□□□□□ -1.76
HMGB1P22-201ENST00000505315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 hCG_1807616A0A1W2PRN6 198 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 BTN3A1O00481 513 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 NRP2O60462 931 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 RASSF9O75901 435 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 ACTL6BO94805 426 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 AHSGP02765 367 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 IGF1RP08069 1367 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 CELA3BP08861 270 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 GLB1P16278 677 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 EN2P19622 333 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 MALP21145 153 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 MUTP22033 750 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 ARL3P36405 182 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 PIK3CAP42336 1068 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 SMCPP49901 116 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 GALK1P51570 392 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 PRKAA2P54646 552 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 POLE2P56282 527 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 VAMP2P63027 116 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 FOXO4P98177 505 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 CDC42EP1Q00587 391 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 MGAT5Q09328 741 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 SLC13A2Q13183 592 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 SMC1AQ14683 1233 aaKnown RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 RASA2Q15283 850 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 CHRNA2Q15822 529 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 FLYWCH1Q4VC44 716 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 VWA3BQ502W6 1294 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 DNAJC21Q5F1R6 531 aaKnown RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 ATPAF1Q5TC12 328 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 LIN54Q6MZP7 749 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 RNF111Q6ZNA4 994 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 ZNF765Q7L2R6 523 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 R3HCC1LQ7Z5L2 792 aaKnown RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 DNAJB7Q7Z6W7 309 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 FBXO11Q86XK2 927 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 LYSMD2Q8IV50 215 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 GLB1L2Q8IW92 636 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 CEP57L1Q8IYX8 460 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 TAGAPQ8N103 731 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 LZTR1Q8N653 840 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 CDYL2Q8N8U2 506 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 GLIS1Q8NBF1 620 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 ZMIZ2Q8NF64 920 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 OR10H5Q8NGA6 315 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 OTUD7AQ8TE49 926 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 HERVK_113Q902F9 699 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 CUL5Q93034 780 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 CCDC47Q96A33 483 aaKnown RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 SNX27Q96L92 541 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 JAKMIP1Q96N16 626 aaKnown RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 FMNL2Q96PY5 1086 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 ADPGKQ9BRR6 497 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 DUSP23Q9BVJ7 150 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 MXD3Q9BW11 206 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 MRPL18Q9H0U6 180 aaKnown RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 WDCPQ9H6R7 721 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 ACAD9Q9H845 621 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 MANSC1Q9H8J5 431 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 EPB41L4AQ9HCS5 686 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 INCENPQ9NQS7 918 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 MYOTQ9UBF9 498 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 DUSP13Q9UII6 198 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 PCDHGB4Q9UN71 923 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 CNPY2Q9Y2B0 182 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 ZNF281Q9Y2X9 895 aa4.08□□□□□ -1.76
HMGB1P22-201ENST00000505315 SOS1Q07889 1333 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 WASH4PA8MWX3 477 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 SHISA8B8ZZ34 492 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 GOLGA6L22H0YM25 854 aa4.07□□□□□ -1.76
HMGB1P22-201ENST00000505315 H3BS24 57 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms