RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 DNAJB4Q9UDY4 337 aa15.69■□□□□ 0.1
USP11-212ENST00000497179 RWDD2AQ9UIY3 292 aa15.69■□□□□ 0.1
USP11-212ENST00000497179 C2CD2Q9Y426 696 aa15.69■□□□□ 0.1
USP11-212ENST00000497179 C5orf67F2Z3F1 127 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 CETN3O15182 167 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
USP11-212ENST00000497179 NFICP08651 508 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 BMPR1AP36894 532 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 SLC11A1P49279 550 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 BCAR1P56945 870 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 FKBP3Q00688 224 aaKnown RBP15.68■□□□□ 0.1
USP11-212ENST00000497179 SOX4Q06945 474 aaPredicted RBP15.68■□□□□ 0.1
USP11-212ENST00000497179 ADAM9Q13443 819 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 TMEM132DQ14C87 1099 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 PSMD6Q15008 389 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 SURF1Q15526 300 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 ZBTB6Q15916 424 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 STX1AQ16623 288 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 EPC2Q52LR7 807 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 CT47A1Q5JQC4 288 aaPredicted RBP15.68■□□□□ 0.1
USP11-212ENST00000497179 CEP135Q66GS9 1140 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 JADE1Q6IE81 842 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 KCNT2Q6UVM3 1135 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 NT5DC4Q86YG4 428 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 EFCAB13Q8IY85 973 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 RDH13Q8NBN7 331 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 KIF12Q96FN5 646 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 UROC1Q96N76 676 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 MKNK1Q9BUB5 465 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 PLVAPQ9BX97 442 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 ANO10Q9NW15 660 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 UBQLN1Q9UMX0 589 aaKnown RBP15.68■□□□□ 0.1
USP11-212ENST00000497179 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 PCDHB12Q9Y5F1 795 aa15.68■□□□□ 0.1
USP11-212ENST00000497179 SLC16A3O15427 465 aaKnown RBP15.67■□□□□ 0.1
USP11-212ENST00000497179 XPOTO43592 962 aaKnown RBP15.67■□□□□ 0.1
USP11-212ENST00000497179 AKAP3O75969 853 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 RB1P06400 928 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 GALTP07902 379 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 CYP3A5P20815 502 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 ERCC5P28715 1186 aaPredicted RBP15.67■□□□□ 0.1
USP11-212ENST00000497179 PPM1AP35813 382 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 PSMC2P35998 433 aaKnown RBP15.67■□□□□ 0.1
USP11-212ENST00000497179 PBX3P40426 434 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 STX17P56962 302 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 SPAG1Q07617 926 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 FAM186BQ8IYM0 893 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 SLC39A11Q8N1S5 342 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 C18orf25Q96B23 403 aaPredicted RBP15.67■□□□□ 0.1
USP11-212ENST00000497179 CEP63Q96MT8 703 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 GZF1Q9H116 711 aaPredicted RBP15.67■□□□□ 0.1
USP11-212ENST00000497179 TTYH1Q9H313 450 aaPredicted RBP15.67■□□□□ 0.1
USP11-212ENST00000497179 ZNF576Q9H609 170 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 PDE11AQ9HCR9 933 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 TUBGCP4Q9UGJ1 667 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
USP11-212ENST00000497179 COL4A4P53420 1690 aaPredicted RBP15.67■□□□□ 0.1
USP11-212ENST00000497179 TRIP11Q15643 1979 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 CASTOR2A6NHX0 329 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 NRP1O14786 923 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 OR1G1P47890 313 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 ALDH7A1P49419 539 aaKnown RBP15.66■□□□□ 0.1
USP11-212ENST00000497179 FXR1P51114 621 aaKnown RBP eCLIP15.66■□□□□ 0.1
USP11-212ENST00000497179 TYRO3Q06418 890 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 ENPEPQ07075 957 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 ZNF697Q5TEC3 545 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 SPATA1Q5VX52 437 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 WDR49Q8IV35 697 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 CSGALNACT2Q8N6G5 542 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 FBXO22Q8NEZ5 403 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 BEST2Q8NFU1 509 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 PLEKHO2Q8TD55 490 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 MED15Q96RN5 788 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 CGRRF1Q99675 332 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 C11orf84Q9BUA3 381 aaPredicted RBP15.66■□□□□ 0.1
USP11-212ENST00000497179 GOLGA2P5Q9HBQ8 144 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 MARCH5Q9NX47 278 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 SPG21Q9NZD8 308 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 PTPRJQ12913 1337 aa15.66■□□□□ 0.1
USP11-212ENST00000497179 ALDH2P05091 517 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 EPB41P11171 864 aaKnown RBP15.65■□□□□ 0.1
USP11-212ENST00000497179 LRPAP1P30533 357 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 RPL9P32969 192 aaKnown RBP15.65■□□□□ 0.1
USP11-212ENST00000497179 MCCD1P59942 119 aaPredicted RBP15.65■□□□□ 0.1
USP11-212ENST00000497179 UPP1Q16831 310 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 ZSCAN23Q3MJ62 389 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 INTS8Q75QN2 995 aaKnown RBP15.65■□□□□ 0.1
USP11-212ENST00000497179 TMEM173Q86WV6 379 aaPredicted RBP15.65■□□□□ 0.1
USP11-212ENST00000497179 KLHL23Q8NBE8 558 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 TMC2Q8TDI7 906 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 PARD3BQ8TEW8 1205 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 BCL7CQ8WUZ0 217 aaPredicted RBP15.65■□□□□ 0.1
USP11-212ENST00000497179 ARNTL2Q8WYA1 636 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 CCDC127Q96BQ5 260 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 EEF2KMTQ96G04 330 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 DDX27Q96GQ7 796 aaKnown RBP15.65■□□□□ 0.1
USP11-212ENST00000497179 BORCS6Q96GS4 357 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 PAAF1Q9BRP4 392 aa15.65■□□□□ 0.1
USP11-212ENST00000497179 FUCA2Q9BTY2 467 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms