RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TMEM191BP0C7N4 346 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 KCNE1P15382 129 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 ERCC5P28715 1186 aaPredicted RBP12.35□□□□□ -0.43
NUP50-216ENST00000486184 PPM1AP35813 382 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 OR1G1P47890 313 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
NUP50-216ENST00000486184 TYRO3Q06418 890 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 SPAG1Q07617 926 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 CYP24A1Q07973 514 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 CCDC40Q4G0X9 1142 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 HABP4Q5JVS0 413 aaKnown RBP12.35□□□□□ -0.43
NUP50-216ENST00000486184 ZNF697Q5TEC3 545 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 JADE1Q6IE81 842 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 FOXR2Q6PJQ5 311 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 ALKAL1Q6UXT8 129 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 NT5DC4Q86YG4 428 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 ZSWIM2Q8NEG5 633 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 BEST2Q8NFU1 509 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 TMEM174Q8WUU8 243 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 CCDC127Q96BQ5 260 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 FBXL18Q96ME1 805 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 CEP63Q96MT8 703 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 UROC1Q96N76 676 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
NUP50-216ENST00000486184 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 CWH43Q9H720 699 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 DMAC2Q9NW81 257 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 MIOSQ9NXC5 875 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 DERAQ9Y315 318 aa12.35□□□□□ -0.43
NUP50-216ENST00000486184 TMEM265A0A087WTH1 108 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 CASTOR2A6NHX0 329 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 MAPK13O15264 365 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 SLC16A3O15427 465 aaKnown RBP12.34□□□□□ -0.43
NUP50-216ENST00000486184 DDHD2O94830 711 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 TNNC2P02585 160 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 ALDH2P05091 517 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 ADRB2P07550 413 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 NFICP08651 508 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 DLATP10515 647 aaKnown RBP12.34□□□□□ -0.43
NUP50-216ENST00000486184 TNNI1P19237 187 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 PMS1P54277 932 aaKnown RBP12.34□□□□□ -0.43
NUP50-216ENST00000486184 BCAR1P56945 870 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
NUP50-216ENST00000486184 TAP1Q03518 808 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 PSMD6Q15008 389 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 ZSCAN23Q3MJ62 389 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 XKR4Q5GH76 650 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 TTI2Q6NXR4 508 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 KCNT2Q6UVM3 1135 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 LRRC55Q6ZSA7 311 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 INTS8Q75QN2 995 aaKnown RBP12.34□□□□□ -0.43
NUP50-216ENST00000486184 ZNF280BQ86YH2 543 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 COLGALT1Q8NBJ5 622 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 GSTCDQ8NEC7 633 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 CLP1Q92989 425 aaKnown RBP12.34□□□□□ -0.43
NUP50-216ENST00000486184 ANKRD36BP1Q96IX9 119 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 COLEC11Q9BWP8 271 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 NRDE2Q9H7Z3 1164 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 PDE11AQ9HCR9 933 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 HCSTQ9UBK5 93 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 PLAGL2Q9UPG8 496 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 FAN1Q9Y2M0 1017 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
NUP50-216ENST00000486184 AKAP3O75969 853 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 CLSTN1O94985 981 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 GNA14O95837 355 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 CYP3A5P20815 502 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 BMPR1AP36894 532 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 CASP4P49662 377 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 ERVK-21P61565 698 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 KRT17Q04695 432 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 DSC1Q08554 894 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 ANO6Q4KMQ2 910 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 CREBRFQ8IUR6 639 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 WDR49Q8IV35 697 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 FAM114A1Q8IWE2 563 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 COLGALT2Q8IYK4 626 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 ARNTL2Q8WYA1 636 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
NUP50-216ENST00000486184 EEF2KMTQ96G04 330 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.44
NUP50-216ENST00000486184 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 MFSD14AQ96MC6 490 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 ZMAT2Q96NC0 199 aaKnown RBP12.33□□□□□ -0.44
NUP50-216ENST00000486184 CGRRF1Q99675 332 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 C17orf80Q9BSJ5 609 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 C11orf84Q9BUA3 381 aaPredicted RBP12.33□□□□□ -0.44
NUP50-216ENST00000486184 PLVAPQ9BX97 442 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 SRRTQ9BXP5 876 aaKnown RBP12.33□□□□□ -0.44
NUP50-216ENST00000486184 DNAJC25Q9H1X3 360 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 CXCL16Q9H2A7 254 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 ZNF576Q9H609 170 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 CERS4Q9HA82 394 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 METTL14Q9HCE5 456 aaKnown RBP12.33□□□□□ -0.44
NUP50-216ENST00000486184 SPG21Q9NZD8 308 aa12.33□□□□□ -0.44
NUP50-216ENST00000486184 MAGEC2Q9UBF1 373 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms