RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ERCC4Q92889 916 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 SAAL1Q96ER3 474 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 KIF12Q96FN5 646 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 FAM213AQ9BRX8 229 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 KCTD10Q9H3F6 313 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 TLR9Q9NR96 1032 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 UBQLN1Q9UMX0 589 aaKnown RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 PRG3Q9Y2Y8 225 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 DERAQ9Y315 318 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 CITO14578 2027 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 ZNF233A6NK53 670 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 CALUO43852 315 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-219ENST00000479941 SLC34A2O95436 690 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 DNAJB1P25685 340 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 RPL9P32969 192 aaKnown RBP11.76□□□□□ -0.53
ATG4B-219ENST00000479941 PPP1R2P41236 205 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 MYBPC2Q14324 1141 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 BMS1Q14692 1282 aaKnown RBP11.76□□□□□ -0.53
ATG4B-219ENST00000479941 SURF1Q15526 300 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 ZBTB6Q15916 424 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 UPP1Q16831 310 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 TIGD5Q53EQ6 642 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 DCLRE1AQ6PJP8 1040 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 NT5DC4Q86YG4 428 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 SLC9A9Q8IVB4 645 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 PPP2R3CQ969Q6 453 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 NGRNQ9NPE2 291 aaKnown RBP11.76□□□□□ -0.53
ATG4B-219ENST00000479941 MARCH5Q9NX47 278 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 RBAKQ9NYW8 714 aaPredicted RBP11.76□□□□□ -0.53
ATG4B-219ENST00000479941 ADAM28Q9UKQ2 775 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 MAPK8IP1Q9UQF2 711 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 C2CD2Q9Y426 696 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 REV3LO60673 3130 aa11.76□□□□□ -0.53
ATG4B-219ENST00000479941 MYO7AQ13402 2215 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-219ENST00000479941 XIRP2A4UGR9 3374 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 TMEM189-UBE2V1I3L0A0 370 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 EXOC3O60645 756 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 TADA2AO75478 443 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 SOD2P04179 222 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 LRPAP1P30533 357 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 CLCNKBP51801 687 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 ERVFC1P60507 584 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 SOX4Q06945 474 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-219ENST00000479941 STIM1Q13586 685 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 TMEM132DQ14C87 1099 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 SNRNP35Q16560 246 aaKnown RBP11.75□□□□□ -0.53
ATG4B-219ENST00000479941 CAMK4Q16566 473 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 NFIL3Q16649 462 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 TMC7Q7Z402 723 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 CBWD2Q8IUF1 395 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 SMYD4Q8IYR2 804 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-219ENST00000479941 VPS52Q8N1B4 723 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 TRIML1Q8N9V2 468 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 ZSWIM2Q8NEG5 633 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 BEST2Q8NFU1 509 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 NOC3LQ8WTT2 800 aaKnown RBP11.75□□□□□ -0.53
ATG4B-219ENST00000479941 BCL7CQ8WUZ0 217 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-219ENST00000479941 C18orf25Q96B23 403 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-219ENST00000479941 TCF25Q9BQ70 676 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 PAAF1Q9BRP4 392 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 CLSTN2Q9H4D0 955 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 NSUN3Q9H649 340 aaKnown RBP11.75□□□□□ -0.53
ATG4B-219ENST00000479941 GOLGA2P5Q9HBQ8 144 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 MAN1B1Q9UKM7 699 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 TRIP11Q15643 1979 aa11.75□□□□□ -0.53
ATG4B-219ENST00000479941 PODXLO00592 558 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 FSCN2O14926 492 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 TRAPPC3O43617 180 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 B3GAT3O94766 335 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 KIF4AO95239 1232 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 EFEMP2O95967 443 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 MBD3O95983 291 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 NFICP08651 508 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 CTSAP10619 480 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 RPL13P26373 211 aaKnown RBP11.74□□□□□ -0.53
ATG4B-219ENST00000479941 IRS1P35568 1242 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 PRCPP42785 496 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 CYP2J2P51589 502 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 SPAG1Q07617 926 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 ELAVL2Q12926 359 aaKnown RBP11.74□□□□□ -0.53
ATG4B-219ENST00000479941 MORC3Q14149 939 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 SMC1AQ14683 1233 aaKnown RBP11.74□□□□□ -0.53
ATG4B-219ENST00000479941 SPATA1Q5VX52 437 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 JADE1Q6IE81 842 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 FUT10Q6P4F1 479 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 RNF168Q8IYW5 571 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-219ENST00000479941 ADSSL1Q8N142 457 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 MICALL1Q8N3F8 863 aa11.74□□□□□ -0.53
ATG4B-219ENST00000479941 MAFAQ8NHW3 353 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-219ENST00000479941 CACTINQ8WUQ7 758 aaKnown RBP11.74□□□□□ -0.53
ATG4B-219ENST00000479941 RABGGTAQ92696 567 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms