RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 GOLPH3Q9H4A6 298 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 CYP39A1Q9NYL5 469 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 MKL2Q9ULH7 1088 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 INO80B-WBP1J3KQ70 363 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 MED7O43513 233 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 ITGA4P13612 1032 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 C1orf146Q5VVC0 180 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 ARMCX2Q7L311 632 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 FBXO11Q86XK2 927 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 DNAJC9Q8WXX5 260 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 SEC14L1Q92503 715 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 TNFRSF25Q93038 417 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 P2RX5Q93086 422 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 NDNQ99608 321 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 CELF4Q9BZC1 486 aaKnown RBP12.16□□□□□ -0.46
U2AF1-209ENST00000475639 INO80BQ9C086 356 aaPredicted RBP12.16□□□□□ -0.46
U2AF1-209ENST00000475639 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 PREBQ9HCU5 417 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 SSU72P8A0A1W2PR75 194 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 GNPATO15228 680 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 ETNK1Q9HBU6 452 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 ARPP21Q9UBL0 812 aaPredicted RBP12.15□□□□□ -0.46
U2AF1-209ENST00000475639 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 GJB6O95452 261 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 PAMP19021 973 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 PSMC2P35998 433 aaKnown RBP12.15□□□□□ -0.46
U2AF1-209ENST00000475639 DYNLT1P63172 113 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
U2AF1-209ENST00000475639 C1orf228Q6PIY5 440 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.15□□□□□ -0.46
U2AF1-209ENST00000475639 FANCBQ8NB91 859 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 TTC17Q96AE7 1141 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
U2AF1-209ENST00000475639 PACSIN1Q9BY11 444 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.46
U2AF1-209ENST00000475639 LZTS1Q9Y250 596 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 TMEM94Q12767 1356 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 ZNF197O14709 1029 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 CCNE1P24864 410 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 PSMC1P62191 440 aaKnown RBP12.15□□□□□ -0.46
U2AF1-209ENST00000475639 LLGL1Q15334 1064 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 NPY5RQ15761 445 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 IMPG1Q17R60 797 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 DEPDC1Q5TB30 811 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 PKD1L3Q7Z443 1732 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 ZNF280CQ8ND82 737 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 ACTRT1Q8TDG2 376 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 GANCQ8TET4 914 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 TUBGCP3Q96CW5 907 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 GALNT8Q9NY28 637 aa12.15□□□□□ -0.46
U2AF1-209ENST00000475639 CAB39Q9Y376 341 aaPredicted RBP12.15□□□□□ -0.46
U2AF1-209ENST00000475639 CCDC78A2IDD5 438 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 USP17L12C9JPN9 530 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 USP17L21D6R901 530 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 CCDC188H7C350 402 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 TOM1O60784 492 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 NUDT17P0C025 328 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 CNGA2Q16280 664 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ARL13BQ3SXY8 428 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 DEPDC1BQ8WUY9 529 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 BTN2A2Q8WVV5 523 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ABHD8Q96I13 439 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 APOL6Q9BWW8 343 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 DMAP1Q9NPF5 467 aaPredicted RBP12.14□□□□□ -0.47
U2AF1-209ENST00000475639 MYH4Q9Y623 1939 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 KLRF2D3W0D1 207 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 CES2O00748 559 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ATP6V1G1O75348 118 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 UNC5CO95185 931 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ADD2P35612 726 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 CYP4A11Q02928 519 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 RUNX1T1Q06455 604 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 MGAT5Q09328 741 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 NR1H3Q13133 447 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 MAN2A1Q16706 1144 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 RABGAP1LQ5R372 815 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 SIX6OS1Q8N1H7 587 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ATP8B4Q8TF62 1192 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 ANKS1AQ92625 1134 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 EXT2Q93063 718 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 KIF17Q9P2E2 1029 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 RGPD2P0DJD1 1756 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 TCP11X1B4DZS4 312 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 EIF3DO15371 548 aaKnown RBP eCLIP12.14□□□□□ -0.47
U2AF1-209ENST00000475639 BNIP3LO60238 219 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 SNX2O60749 519 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 TMEM62Q0P6H9 643 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 WASHC5Q12768 1159 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 C10orf76Q5T2E6 689 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
U2AF1-209ENST00000475639 OR6B2Q6IFH4 312 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 IRGCQ6NXR0 463 aa12.14□□□□□ -0.47
U2AF1-209ENST00000475639 KCTD6Q8NC69 237 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms