RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GPR62Q9BZJ7 368 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 MAP3K20Q9NYL2 800 aaKnown RBP7.51□□□□□ -1.21
HDAC3-206ENST00000471968 PCDH15Q96QU1 1955 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 KNTC1P50748 2209 aa7.51□□□□□ -1.21
HDAC3-206ENST00000471968 BRINP1O60477 761 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 CSDE1O75534 798 aaKnown RBP7.5□□□□□ -1.21
HDAC3-206ENST00000471968 SNHG28P0DPA3 235 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 JUPP14923 745 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 PTPN2P17706 415 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 ACTN2P35609 894 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 CCR2P41597 374 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 STAT5BP51692 787 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 CLDN6P56747 220 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 TNK2Q07912 1038 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 VAC14Q08AM6 782 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 FCHO2Q0JRZ9 810 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 MYO1EQ12965 1108 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 TMEM196Q5HYL7 178 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 RTP2Q5QGT7 225 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 GPATCH4Q5T3I0 446 aaKnown RBP7.5□□□□□ -1.21
HDAC3-206ENST00000471968 FUT10Q6P4F1 479 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 NFXL1Q6ZNB6 911 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 TMPRSS12Q86WS5 348 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 COLGALT2Q8IYK4 626 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 IFNL3Q8IZI9 196 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 SCLT1Q96NL6 688 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 CDC6Q99741 560 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 CLSTN3Q9BQT9 956 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 CORO1BQ9BR76 489 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 VAT1LQ9HCJ6 419 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 AVENQ9NQS1 362 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-206ENST00000471968 STARD5Q9NSY2 213 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 FAM105AQ9NUU6 356 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 AKT3Q9Y243 479 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
HDAC3-206ENST00000471968 CABIN1Q9Y6J0 2220 aa7.5□□□□□ -1.21
HDAC3-206ENST00000471968 GCOM1H8Y6P7 765 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-206ENST00000471968 ZNF197O14709 1029 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 ADAM12O43184 909 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 DIAPH2O60879 1101 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 POLR2MP0CAP2 368 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 RTP5Q14D33 572 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 IGFBP7Q16270 282 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 ZSCAN25Q6NSZ9 544 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 PDZD4Q76G19 769 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-206ENST00000471968 HAUS6Q7Z4H7 955 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 RABEPKQ7Z6M1 372 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 GPIHBP1Q8IV16 184 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 GPR65Q8IYL9 337 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 DEFB119Q8N690 84 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 ZNF248Q8NDW4 579 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 MDGA1Q8NFP4 955 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 BAHD1Q8TBE0 780 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-206ENST00000471968 RHBDD1Q8TEB9 315 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 SPACA7Q96KW9 195 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 CNOT6LQ96LI5 555 aaKnown RBP7.49□□□□□ -1.21
HDAC3-206ENST00000471968 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.49□□□□□ -1.21
HDAC3-206ENST00000471968 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 RNF39Q9H2S5 420 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 BOLA2Q9H3K6 86 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 TRPV4Q9HBA0 871 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 KANSL3Q9P2N6 904 aa7.49□□□□□ -1.21
HDAC3-206ENST00000471968 NOB1Q9ULX3 412 aaKnown RBP7.49□□□□□ -1.21
HDAC3-206ENST00000471968 TNRC6BQ9UPQ9 1833 aaKnown RBP7.49□□□□□ -1.21
HDAC3-206ENST00000471968 NIPBLQ6KC79 2804 aaeCLIP7.49□□□□□ -1.21
HDAC3-206ENST00000471968 HBP1O60381 514 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 DARSP14868 501 aaKnown RBP7.48□□□□□ -1.21
HDAC3-206ENST00000471968 GJA1P17302 382 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 HNF1BP35680 557 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 P2RY2P41231 377 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 CLCN3P51790 818 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 CTDSPL2Q05D32 466 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 PSMD5Q16401 504 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 PLEKHG6Q3KR16 790 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 TBC1D25Q3MII6 688 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 LMBRD2Q68DH5 695 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-206ENST00000471968 PLPPR4Q7Z2D5 763 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 RASSF3Q86WH2 238 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 SSH3Q8TE77 659 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 SNRNP27Q8WVK2 155 aaKnown RBP7.48□□□□□ -1.21
HDAC3-206ENST00000471968 OSBP2Q969R2 916 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 ACDQ96AP0 544 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 E2F7Q96AV8 911 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 PGBD4Q96DM1 585 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 HIC2Q96JB3 615 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 TRAIPQ9BWF2 469 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 AMNQ9BXJ7 453 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 API5Q9BZZ5 524 aaKnown RBP7.48□□□□□ -1.21
HDAC3-206ENST00000471968 NRSN2Q9GZP1 204 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 SLITRK6Q9H5Y7 841 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 RSAD1Q9HA92 442 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 IL1RAPL2Q9NP60 686 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 GPRC5CQ9NQ84 441 aa7.48□□□□□ -1.21
HDAC3-206ENST00000471968 NOP58Q9Y2X3 529 aaKnown RBP7.48□□□□□ -1.21
HDAC3-206ENST00000471968 ANO9A1A5B4 782 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 ZBTB42B2RXF5 422 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 PATL2C9JE40 543 aaKnown RBP7.47□□□□□ -1.21
HDAC3-206ENST00000471968 GPAA1O43292 621 aa7.47□□□□□ -1.21
HDAC3-206ENST00000471968 NR1I2O75469 434 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms