RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 BIN1O00499 593 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 POMCP01189 267 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 ACOT2P49753 483 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 RNASELQ05823 741 aaKnown RBP16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 LRRC63Q05C16 580 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 SAAL1Q96ER3 474 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 FAM213AQ9BRX8 229 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 TMEM175Q9BSA9 504 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 PLVAPQ9BX97 442 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 ASB7Q9H672 318 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 AAASQ9NRG9 546 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 MIOSQ9NXC5 875 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 PLAGL2Q9UPG8 496 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 DERAQ9Y315 318 aa16.24■□□□□ 0.19
CDC42SE1-203ENST00000470278 SMIM28A0A1B0GU29 152 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 PPP1R3GB7ZBB8 358 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 IL18RAPO95256 599 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 NR3C1P04150 777 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 RB1P06400 928 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 THP07101 528 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 PPM1AP35813 382 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 TUSC3Q13454 348 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 SNRNP35Q16560 246 aaKnown RBP16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 ISM2Q6H9L7 571 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 NT5DC4Q86YG4 428 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZC3H3Q8IXZ2 948 aaKnown RBP16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 COLGALT2Q8IYK4 626 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 MLKLQ8NB16 471 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 P2RX5Q93086 422 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZMAT2Q96NC0 199 aaKnown RBP16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 PCIF1Q9H4Z3 704 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 EPHX3Q9H6B9 360 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 NRDE2Q9H7Z3 1164 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 SLC38A7Q9NVC3 462 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 RBAKQ9NYW8 714 aaPredicted RBP16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 HCSTQ9UBK5 93 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 C2CD2Q9Y426 696 aa16.23■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZNF233A6NK53 670 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 CLIC2O15247 247 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 B4GALT3O60512 393 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 DDHD2O94830 711 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 NR2F2P24468 414 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 CCNE1P24864 410 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 RPL13P26373 211 aaKnown RBP16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 BMPR1AP36894 532 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 CYP2J2P51589 502 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 SKOR2Q2VWA4 1001 aaPredicted RBP16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 EPC2Q52LR7 807 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZNF280BQ86YH2 543 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 CBWD2Q8IUF1 395 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 COLGALT1Q8NBJ5 622 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZSWIM2Q8NEG5 633 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZNF558Q96NG5 402 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 TSG101Q99816 390 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 C17orf80Q9BSJ5 609 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 WDFY4Q6ZS81 3184 aa16.22■□□□□ 0.19
CDC42SE1-203ENST00000470278 BICDL2A1A5D9 508 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 GOLGA8IPA6NC78 632 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 GOLGA8JA6NMD2 632 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 LACTBL1A8MY62 500 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 MAPK13O15264 365 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 EXOC3O60645 756 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZC3H11AO75152 810 aaKnown RBP eCLIP16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 CYP3A5P20815 502 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 CTNNB1P35222 781 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 BCAR1P56945 870 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 PAK1Q13153 545 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 SKIV2LQ15477 1246 aaKnown RBP16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZBTB6Q15916 424 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 CT47A1Q5JQC4 288 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 GLRA4Q5JXX5 417 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 SPOUT1Q5T280 376 aaKnown RBP16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 CAVIN1Q6NZI2 390 aaKnown RBP16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 KCNT2Q6UVM3 1135 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 UROC1Q96N76 676 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 FAM193BQ96PV7 902 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 C11orf84Q9BUA3 381 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 DNAJB4Q9UDY4 337 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 MTUS1Q9ULD2 1270 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 COG5Q9UP83 839 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 PCDHB12Q9Y5F1 795 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZNF318Q5VUA4 2279 aa16.21■□□□□ 0.19
CDC42SE1-203ENST00000470278 XPOTO43592 962 aaKnown RBP16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 GALTP07902 379 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 SLC11A1P49279 550 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 NLRP12P59046 1061 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 FKBP3Q00688 224 aaKnown RBP16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 ENPEPQ07075 957 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 PSMD6Q15008 389 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 SURF1Q15526 300 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 ANKRD40Q6AI12 368 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 TTI2Q6NXR4 508 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 SLC39A11Q8N1S5 342 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 NELFBQ8WX92 580 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms