RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 HP1BP3Q5SSJ5 553 aaPredicted RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 TREML2Q5T2D2 321 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 TRAPPC11Q7Z392 1133 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 TMEM130Q8N3G9 435 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 SNRNP27Q8WVK2 155 aaKnown RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 CPA5Q8WXQ8 436 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 HAUS1Q96CS2 278 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 DLGAP2Q9P1A6 1054 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 PAIP2BQ9ULR5 123 aaKnown RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 TIAM2Q8IVF5 1701 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 K7ERI5 159 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 LIN7AO14910 233 aaPredicted RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 BCRP11274 1271 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 KCNJ1P48048 391 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 BFSP1Q12934 665 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 TMEM132BQ14DG7 1078 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 CCDC38Q502W7 563 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 CCDC80Q76M96 950 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 NSUN6Q8TEA1 469 aaKnown RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 ZNF653Q96CK0 615 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 ACSF2Q96CM8 615 aaPredicted RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 NDNQ99608 321 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 TTYH3Q9C0H2 523 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 NAGPAQ9UK23 515 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 AMFRQ9UKV5 643 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 BRCA2P51587 3418 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 SGPL1O95470 568 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 PTPRAP18433 802 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 SLCO1A2P46721 670 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 MYBPC2Q14324 1141 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 OTUD6AQ7L8S5 288 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 ERICH1Q86X53 443 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 TSEN2Q8NCE0 465 aaKnown RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 AZI2Q9H6S1 392 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 ZWILCHQ9H900 591 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 PXMP2Q9NR77 195 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 GMNCA6NCL1 334 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 HNRNPCP07910 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP11-206ENST00000469080 TCP1P17987 556 aaKnown RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 PSMC5P62195 406 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 QPCTQ16769 361 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 CRELD2Q6UXH1 353 aaPredicted RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 NANOGNBQ7Z5D8 188 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 CCDC60Q8IWA6 550 aaPredicted RBP13.14□□□□□ -0.31
USP11-206ENST00000469080 TRIM51Q9BSJ1 452 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 TLR10Q9BXR5 811 aa13.14□□□□□ -0.31
USP11-206ENST00000469080 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
USP11-206ENST00000469080 MYCP01106 439 aaPredicted RBP13.13□□□□□ -0.31
USP11-206ENST00000469080 CYP2C8P10632 490 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 RFC5P40937 340 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 NPTX2P47972 431 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 SNRNP35Q16560 246 aaKnown RBP13.13□□□□□ -0.31
USP11-206ENST00000469080 MAP7D1Q3KQU3 841 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 SYCP2LQ5T4T6 812 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 RHPN2Q8IUC4 686 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 SLC35G2Q8TBE7 412 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 SLC7A3Q8WY07 619 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 GMLQ99445 158 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
USP11-206ENST00000469080 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
USP11-206ENST00000469080 TBX3O15119 743 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 GGPS1O95749 300 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 ACTR2P61160 394 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 CBX3Q13185 183 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 GKAP1Q5VSY0 366 aaPredicted RBP13.13□□□□□ -0.31
USP11-206ENST00000469080 SLC47A2Q86VL8 602 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 ARHGEF26Q96DR7 871 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 TRIM11Q96F44 468 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 TUFT1Q9NNX1 390 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
USP11-206ENST00000469080 MYH11P35749 1972 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 GOLGA8SH3BPF8 625 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 LSM1O15116 133 aaKnown RBP13.12□□□□□ -0.31
USP11-206ENST00000469080 PIK3CAP42336 1068 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 PHLDB3Q6NSJ2 640 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 KDM7AQ6ZMT4 941 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 FRMD5Q7Z6J6 570 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 SCYL3Q8IZE3 742 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 SLC5A5Q92911 643 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 RPS6KC1Q96S38 1066 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 SLC38A10Q9HBR0 1119 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 ZNF510Q9Y2H8 683 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 PITPNM2Q9BZ72 1349 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 GSTTP1A0A1W2PQM5 241 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 DYTNA2CJ06 578 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 ALOX15P16050 662 aaPredicted RBP13.12□□□□□ -0.31
USP11-206ENST00000469080 PLTPP55058 493 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 ORC2Q13416 577 aaPredicted RBP13.12□□□□□ -0.31
USP11-206ENST00000469080 MEA1Q16626 185 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
USP11-206ENST00000469080 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms