RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TERF2Q15554 542 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 LRRC31Q6UY01 552 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 SYDE1Q6ZW31 735 aaPredicted RBP14.61□□□□□ -0.07
BRAT1-203ENST00000467558 BCAP29Q9UHQ4 241 aa14.61□□□□□ -0.07
BRAT1-203ENST00000467558 PARP4Q9UKK3 1724 aaKnown RBP14.6□□□□□ -0.07
BRAT1-203ENST00000467558 LRRC10BA6NIK2 292 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 SPDYE16A6NNV3 312 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-203ENST00000467558 PIK3CDO00329 1044 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 GSTA1P08263 222 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 GSTA2P09210 222 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 COMTP21964 271 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 CPT1AP50416 773 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 TMEM62Q0P6H9 643 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 PFDN4Q9NQP4 134 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 STK38LQ9Y2H1 464 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 MORC2Q9Y6X9 1032 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-203ENST00000467558 MEIS2O14770 477 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 WEE2P0C1S8 567 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 PTPRAP18433 802 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 GNASQ5JWF2 1037 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 TATDN1Q6P1N9 297 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 NOTUMQ6P988 496 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 TMEM117Q9H0C3 514 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 KCNMB3Q9NPA1 279 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 KCNH4Q9UQ05 1017 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 CTIFO43310 598 aaKnown RBP14.6□□□□□ -0.07
BRAT1-203ENST00000467558 LIG3P49916 1009 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 KPNA2P52292 529 aaKnown RBP14.6□□□□□ -0.07
BRAT1-203ENST00000467558 ROR1Q01973 937 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 KRT17Q04695 432 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 ASPHQ12797 758 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 CUL2Q13617 745 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 CCNI2Q6ZMN8 369 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-203ENST00000467558 PLEKHH3Q7Z736 793 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 CARD9Q9H257 536 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 GBA2Q9HCG7 927 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-203ENST00000467558 RBM12Q9NTZ6 932 aaKnown RBP14.6□□□□□ -0.07
BRAT1-203ENST00000467558 PCDHAC2Q9Y5I4 1007 aa14.6□□□□□ -0.07
BRAT1-203ENST00000467558 EML1O00423 815 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CREB3O43889 395 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 KRT38O76015 456 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CYP2C19P33261 490 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 IZUMO3Q5VZ72 239 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 KCNK18Q7Z418 384 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CDKL3Q8IVW4 592 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-203ENST00000467558 OPTNQ96CV9 577 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 PGBD4Q96DM1 585 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 FBXL5Q9UKA1 691 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 MAGED2Q9UNF1 606 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-203ENST00000467558 TFR2Q9UP52 801 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 FRMPD4Q14CM0 1322 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CYP3A7-CYP3A51PA0A087WV96 503 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 RASA4BC9J798 803 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 RASA4O43374 803 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 PHF2O75151 1096 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 RPS6KA5O75582 802 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CYP3A7P24462 503 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 KLHL38Q2WGJ6 581 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 NXNQ6DKJ4 435 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 DEPDC1BQ8WUY9 529 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 VIPAS39Q9H9C1 493 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 SMYD2Q9NRG4 433 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 MID2Q9UJV3 735 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 H3BRJ5 948 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 TRAPPC3O43617 180 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CDR2Q01850 454 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 PDCLQ13371 301 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 GPAT2Q6NUI2 795 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 BTNL9Q6UXG8 535 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 FBXO16Q8IX29 292 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-203ENST00000467558 HAS1Q92839 578 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 HPDLQ96IR7 371 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 SLC38A7Q9NVC3 462 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 ARHGAP20Q9P2F6 1191 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 COL14A1Q05707 1796 aaKnown RBP14.59□□□□□ -0.07
BRAT1-203ENST00000467558 TTI1O43156 1089 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CTSHP09668 335 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CLCN3P51790 818 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 GYS2P54840 703 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 CDR2LQ86X02 465 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-203ENST00000467558 USP38Q8NB14 1042 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 MCEEQ96PE7 176 aa14.59□□□□□ -0.07
BRAT1-203ENST00000467558 PI4K2BG5E9Z4 385 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 MAGOHP61326 146 aaKnown RBP14.58□□□□□ -0.08
BRAT1-203ENST00000467558 PPATQ06203 517 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 SREBF2Q12772 1141 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 TPCN2Q8NHX9 752 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 SPIRE2Q8WWL2 714 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 LACRTQ9GZZ8 138 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 A0A087WUV0 522 aaPredicted RBP14.58□□□□□ -0.08
BRAT1-203ENST00000467558 GOLGA8MH3BSY2 632 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 GZMAP12544 262 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 ARSEP51690 589 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 TSNAXIP1Q2TAA8 658 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 NUGGCQ68CJ6 796 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 ACAD10Q6JQN1 1059 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 MMGT1Q8N4V1 131 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 NOA1Q8NC60 698 aaKnown RBP14.58□□□□□ -0.08
BRAT1-203ENST00000467558 PPME1Q9Y570 386 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms