RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 FOXR2Q6PJQ5 311 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 SASS6Q6UVJ0 657 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 ARMCX6Q7L4S7 300 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 CATSPER3Q86XQ3 398 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 SYT2Q8N9I0 419 aaPredicted RBP6.1□□□□□ -1.43
VPS41-211ENST00000466017 SOCS4Q8WXH5 440 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 RAD54LQ92698 747 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 DHX58Q96C10 678 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 CRELD1Q96HD1 420 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 RHOVQ96L33 236 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 DPH2Q9BQC3 489 aaPredicted RBP6.1□□□□□ -1.43
VPS41-211ENST00000466017 EIF2AK1Q9BQI3 630 aaKnown RBP6.1□□□□□ -1.43
VPS41-211ENST00000466017 BPIFA3Q9BQP9 254 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 NOC4LQ9BVI4 516 aaKnown RBP6.1□□□□□ -1.43
VPS41-211ENST00000466017 UNC45AQ9H3U1 944 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 R3HDMLQ9H3Y0 253 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 ABHD16BQ9H3Z7 469 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 VTA1Q9NP79 307 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 BLOC1S4Q9NUP1 217 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 ANO10Q9NW15 660 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 KCND2Q9NZV8 630 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 TJP2Q9UDY2 1190 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 DDX41Q9UJV9 622 aaKnown RBP6.1□□□□□ -1.43
VPS41-211ENST00000466017 DNM3Q9UQ16 869 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 PCDHA5Q9Y5H7 936 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 PCDHA10Q9Y5I2 948 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 ZNF236Q9UL36 1845 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 SYCE3A1L190 88 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 PP2D1A8MPX8 630 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 KLRC4O43908 158 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 PEX10O60683 326 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 DNAJA2O60884 412 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 MED24O75448 989 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 RHOBTB3O94955 611 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 WNT11O96014 354 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 PLCG1P19174 1290 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 CDC25AP30304 524 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 GRIK1P39086 918 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 CCT6AP40227 531 aaKnown RBP6.09□□□□□ -1.43
VPS41-211ENST00000466017 QARSP47897 775 aaKnown RBP6.09□□□□□ -1.43
VPS41-211ENST00000466017 SLC12A3P55017 1021 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 PSMC5P62195 406 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 UBXN2AP68543 259 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 NKX3-2P78367 333 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 CRHR2Q13324 411 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 ITGB3BPQ13352 177 aaPredicted RBP6.09□□□□□ -1.43
VPS41-211ENST00000466017 MORC3Q14149 939 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 KARSQ15046 597 aaKnown RBP6.09□□□□□ -1.43
VPS41-211ENST00000466017 CAMK4Q16566 473 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 TAPT1Q6NXT6 567 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 METTL7BQ6UX53 244 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 ABHD15Q6UXT9 468 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 HDXQ7Z353 690 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 MIER3Q7Z3K6 550 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 DPP9Q86TI2 863 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 GAS2L3Q86XJ1 694 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 ABI1Q8IZP0 508 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 PDILTQ8N807 584 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 MLKLQ8NB16 471 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 AFAP1L1Q8TED9 768 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 LRRC15Q8TF66 581 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 SEPT1Q8WYJ6 367 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 LARP4BQ92615 738 aaKnown RBP6.09□□□□□ -1.43
VPS41-211ENST00000466017 KCNN1Q92952 543 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 SMARCE1Q969G3 411 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 CDK5RAP3Q96JB5 506 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 MAML3Q96JK9 1138 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 TIPINQ9BVW5 301 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 PANK2Q9BZ23 570 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 TRIM9Q9C026 710 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 KATNBL1Q9H079 304 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 TSPY26PQ9H489 355 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 ZSWIM4Q9H7M6 989 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 PRDM10Q9NQV6 1147 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 ANKEF1Q9NU02 776 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 RMND1Q9NWS8 449 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 SAGE1Q9NXZ1 904 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 TCEAL9Q9UHQ7 104 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 CPA4Q9UI42 421 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 KCNG1Q9UIX4 513 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 DBR1Q9UK59 544 aaKnown RBP6.09□□□□□ -1.43
VPS41-211ENST00000466017 POLR3KQ9Y2Y1 108 aaPredicted RBP6.09□□□□□ -1.43
VPS41-211ENST00000466017 Q9Y3F1 56 aa6.09□□□□□ -1.43
VPS41-211ENST00000466017 LCTP09848 1927 aa6.09□□□□□ -1.44
VPS41-211ENST00000466017 FRMD3A2A2Y4 597 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 FARP2O94887 1054 aaPredicted RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 STBD1O95210 358 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 SNAI1O95863 264 aaPredicted RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 PRNPP04156 253 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 PGK2P07205 417 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 PLA2G4BP0C869 781 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 HOXD10P28358 340 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 ERCC5P28715 1186 aaPredicted RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 GBP2P32456 591 aaPredicted RBP6.08□□□□□ -1.44
VPS41-211ENST00000466017 RGS2P41220 211 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 MRE11P49959 708 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 SLC26A2P50443 739 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 PRMT2P55345 433 aa6.08□□□□□ -1.44
VPS41-211ENST00000466017 SP2Q02086 613 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms