RNA–Protein interactions for RNA: ENST00000464699.5

KRTCAP3-205, Transcript of keratinocyte associated protein 3, human

TSL 3

Gene KRTCAP3, Length 724 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRTCAP3-205	ENST00000464699	IKZF4	Q9H2S9	585 aa		27.57	■■■□□ 2
KRTCAP3-205	ENST00000464699	CD320	Q9NPF0	282 aa		27.57	■■■□□ 2
KRTCAP3-205	ENST00000464699	MRPL17	Q9NRX2	175 aa	Known RBP	27.57	■■■□□ 2
KRTCAP3-205	ENST00000464699	SLC38A7	Q9NVC3	462 aa		27.57	■■■□□ 2
KRTCAP3-205	ENST00000464699	HPSE	Q9Y251	543 aa		27.57	■■■□□ 2
KRTCAP3-205	ENST00000464699	TISP43	B9A030	160 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	CLASP2	O75122	1294 aa	Known RBP	27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	UROD	P06132	367 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	CXCL8	P10145	99 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	CASP1	P29466	404 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	TNFSF9	P41273	254 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	RBM10	P98175	930 aa	Known RBP	27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	PTCRA	Q6ISU1	281 aa	Predicted RBP	27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	PLEKHA5	Q9HAU0	1116 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	CLEC1B	Q9P126	229 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	USP25	Q9UHP3	1055 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	BARX2	Q9UMQ3	279 aa	Predicted RBP	27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	SSX2IP	Q9Y2D8	614 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699	STYXL1	Q9Y6J8	313 aa		27.56	■■■□□ 2
KRTCAP3-205	ENST00000464699		A0A1W2PQ27	194 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699		A0A1W2PQ64	194 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699		A0A1W2PQD8	194 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	PI4K2B	G5E9Z4	385 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	C2CD2L	O14523	706 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	ACTN4	O43707	911 aa	Known RBP	27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	FAM189A1	O60320	539 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	LILRB3	O75022	631 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	KIF4A	O95239	1232 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	SOX4	Q06945	474 aa	Predicted RBP	27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	KCNC3	Q14003	757 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	CLUL1	Q15846	466 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	PUS10	Q3MIT2	529 aa	Known RBP	27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	ZBTB41	Q5SVQ8	909 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	KIAA1841	Q6NSI8	718 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	LLGL2	Q6P1M3	1020 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	DCLRE1A	Q6PJP8	1040 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	SYCP3	Q8IZU3	236 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	HASPIN	Q8TF76	798 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	HPS3	Q969F9	1004 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	UROC1	Q96N76	676 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	RPF1	Q9H9Y2	349 aa	Known RBP	27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	GOLGA2P5	Q9HBQ8	144 aa		27.55	■■■□□ 2
KRTCAP3-205	ENST00000464699	FAM237A	A0A1B0GTK4	181 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	TTC26	A0AVF1	554 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	PRPF6	O94906	941 aa	Known RBP	27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	SRGAP2B	P0DMP2	458 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	SYK	P43405	635 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	GLUD2	P49448	558 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	CLCNKB	P51801	687 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	CUL4B	Q13620	913 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	POSTN	Q15063	836 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	USP41	Q3LFD5	358 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	KIAA0319	Q5VV43	1072 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	TMEM184A	Q6ZMB5	413 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	STXBP4	Q6ZWJ1	553 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	UNC13D	Q70J99	1090 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	GRAMD1C	Q8IYS0	662 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	FSIP1	Q8NA03	581 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	DDX27	Q96GQ7	796 aa	Known RBP	27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	PAGE5	Q96GU1	130 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	MSLNL	Q96KJ4	702 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	EMILIN2	Q9BXX0	1053 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	CHST7	Q9NS84	486 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	CD207	Q9UJ71	328 aa		27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	AGO2	Q9UKV8	859 aa	Known RBP	27.54	■■■□□ 2
KRTCAP3-205	ENST00000464699	SF3B1	O75533	1304 aa	Known RBP eCLIP	27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	GRXCR2	A6NFK2	248 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	NDUFA8	P51970	172 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	DSG1	Q02413	1049 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	PPP2R3A	Q06190	1150 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	ENOX2	Q16206	610 aa	Known RBP	27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	UPP1	Q16831	310 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	POMGNT1	Q8WZA1	660 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	C18orf25	Q96B23	403 aa	Predicted RBP	27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	B3GALT6	Q96L58	329 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	KLHL5	Q96PQ7	755 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	CPSF3	Q9UKF6	684 aa	Known RBP	27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	HCFC2	Q9Y5Z7	792 aa		27.53	■■■□□ 2
KRTCAP3-205	ENST00000464699	PVALEF	A0A1B0GWK0	134 aa		27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	LACTBL1	A8MY62	500 aa		27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	B3GAT3	O94766	335 aa		27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	CNP	P09543	421 aa	Known RBP	27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	ACOT2	P49753	483 aa		27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	FAM26F	Q5R3K3	315 aa		27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	GLIS3	Q8NEA6	775 aa		27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	TMEM206	Q9H813	350 aa		27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	ANK1	P16157	1881 aa		27.52	■■■□□ 2
KRTCAP3-205	ENST00000464699	FAM86C2P	A6NEL3	165 aa		27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	TMEM189-UBE2V1	I3L0A0	370 aa		27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	ADSS	P30520	456 aa		27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	SPAG1	Q07617	926 aa		27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	ELAVL2	Q12926	359 aa	Known RBP	27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	FAM171A1	Q5VUB5	890 aa		27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	CASP10	Q92851	521 aa		27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	FAM212A	Q96EL1	285 aa		27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	FAM50B	Q9Y247	325 aa		27.51	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	VWA8	A3KMH1	1905 aa		27.5	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	ADRB2	P07550	413 aa		27.5	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	IL9	P15248	144 aa		27.5	■■□□□ 1.99
KRTCAP3-205	ENST00000464699	IGFBP6	P24592	240 aa	Predicted RBP	27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms