RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 CLDN3O15551 220 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 TJP3O95049 919 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 ZWINTO95229 277 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 CDR2Q01850 454 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 RCN2Q14257 317 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 CTC1Q2NKJ3 1217 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 PHC3Q8NDX5 983 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 CRYGNQ8WXF5 182 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 MIPEPQ99797 713 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 ANO3Q9BYT9 981 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 ZFP69BQ9UJL9 534 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 FRMD4BQ9Y2L6 1034 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 NEU2Q9Y3R4 380 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 A0A1W2PRG0 241 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 ATP9AO75110 1047 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 LRRN2O75325 713 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 SLC34A1Q06495 639 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 TMED2Q15363 201 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 CCDC6Q16204 474 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 Q4G0T1 1027 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 TAF1BQ53T94 588 aaPredicted RBP13.05□□□□□ -0.32
ITGB5-202ENST00000460797 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
ITGB5-202ENST00000460797 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 B4GALNT2Q8NHY0 566 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 C1orf54Q8WWF1 131 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 SCG3Q8WXD2 468 aaKnown RBP13.05□□□□□ -0.32
ITGB5-202ENST00000460797 POLR3CQ9BUI4 534 aaPredicted RBP13.05□□□□□ -0.32
ITGB5-202ENST00000460797 CADM1Q9BY67 442 aaKnown RBP13.05□□□□□ -0.32
ITGB5-202ENST00000460797 SLCO1B3Q9NPD5 702 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 DMAP1Q9NPF5 467 aaPredicted RBP13.05□□□□□ -0.32
ITGB5-202ENST00000460797 GTF3C4Q9UKN8 822 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
ITGB5-202ENST00000460797 RGL2O15211 777 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 EXOC3O60645 756 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 CCDC22O60826 627 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 TRIM49P0CI25 452 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 TRIM49CP0CI26 452 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 KCNA3P22001 575 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 BTDP43251 543 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 PSMC4P43686 418 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 CACNA2D1P54289 1103 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 AP1B1Q10567 949 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 KPNB1Q14974 876 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 RCN1Q15293 331 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 LRRC74BQ6ZQY2 392 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 NLRP9Q7RTR0 991 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 CLNKQ7Z7G1 428 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 LRRC47Q8N1G4 583 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 ATL2Q8NHH9 583 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 NRG4Q8WWG1 115 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 NCSTNQ92542 709 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 PTPRN2Q92932 1015 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 NR1H4Q96RI1 486 aaPredicted RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 PCDHB18PQ96TA0 734 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 NUP85Q9BW27 656 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 DCLK3Q9C098 648 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 BHMT2Q9H2M3 363 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 MMADHCQ9H3L0 296 aaPredicted RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 CHST7Q9NS84 486 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 STX18Q9P2W9 335 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 P4HA2O15460 535 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 CENPCQ03188 943 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 BFSP1Q12934 665 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 MYBPC2Q14324 1141 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 GRIK5Q16478 980 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 RFWD3Q6PCD5 774 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 HS2ST1Q7LGA3 356 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 CPNE8Q86YQ8 564 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 SLC9A9Q8IVB4 645 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 FAM20AQ96MK3 541 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 PAIP2Q9BPZ3 127 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 BTBD10Q9BSF8 475 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 TRABDQ9H4I3 376 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 AGPAT3Q9NRZ7 376 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 PCMTD2Q9NV79 361 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 DNAJC17Q9NVM6 304 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 IRAK4Q9NWZ3 460 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 DDX43Q9NXZ2 648 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 ZNF212Q9UDV6 495 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 NOCTQ9UK39 431 aaKnown RBP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
ITGB5-202ENST00000460797 SLC4A7Q9Y6M7 1214 aa13.04□□□□□ -0.32
ITGB5-202ENST00000460797 PSMG1O95456 288 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 MYBL1P10243 752 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 GCAP28676 217 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 POLE2P56282 527 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 RASA2Q15283 850 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 RINT1Q6NUQ1 792 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 FAM81AQ8TBF8 368 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 CFAP57Q96MR6 1250 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 UIMC1Q96RL1 719 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 BCAS3Q9H6U6 928 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 PPCSQ9HAB8 311 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms