RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 KCNC3Q14003 757 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 FUT10Q6P4F1 479 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 CD300LGQ6UXG3 332 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 FMR1NBQ8N0W7 255 aaPredicted RBP17.13■□□□□ 0.33
ACTB-206ENST00000443528 VN1R2Q8NFZ6 395 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 ZNF507Q8TCN5 953 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 HASPINQ8TF76 798 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 POMGNT1Q8WZA1 660 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 ASB2Q96Q27 587 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 CDCA3Q99618 268 aaPredicted RBP17.13■□□□□ 0.33
ACTB-206ENST00000443528 HERC2P3Q9BVR0 1158 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 TMEM206Q9H813 350 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 AGO2Q9UKV8 859 aaKnown RBP17.13■□□□□ 0.33
ACTB-206ENST00000443528 SPTBN5Q9NRC6 3674 aaKnown RBP17.13■□□□□ 0.33
ACTB-206ENST00000443528 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.12■□□□□ 0.33
ACTB-206ENST00000443528 TBX10O75333 385 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 TADA2AO75478 443 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 KCNA5P22460 613 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 SPAG1Q07617 926 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 POSTNQ15063 836 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 ZBTB6Q15916 424 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 UPP1Q16831 310 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 KMT5BQ4FZB7 885 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 CRELD2Q6UXH1 353 aaPredicted RBP17.12■□□□□ 0.33
ACTB-206ENST00000443528 EP400NLQ6ZTU2 488 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 STXBP4Q6ZWJ1 553 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 SYCP3Q8IZU3 236 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 C3orf58Q8NDZ4 430 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 ZSWIM2Q8NEG5 633 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 ENGASEQ8NFI3 743 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 SCFD1Q8WVM8 642 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 UROC1Q96N76 676 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 RPF1Q9H9Y2 349 aaKnown RBP17.12■□□□□ 0.33
ACTB-206ENST00000443528 SLC39A2Q9NP94 309 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 CHST7Q9NS84 486 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 SLC38A7Q9NVC3 462 aa17.12■□□□□ 0.33
ACTB-206ENST00000443528 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 H3BQ06 376 aaPredicted RBP17.11■□□□□ 0.33
ACTB-206ENST00000443528 TMEM189-UBE2V1I3L0A0 370 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 MYL1P05976 194 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 GARTP22102 1010 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 CA8P35219 290 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 KCNQ1P51787 676 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 PPP2R3AQ06190 1150 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
ACTB-206ENST00000443528 BMS1Q14692 1282 aaKnown RBP17.11■□□□□ 0.33
ACTB-206ENST00000443528 LEXMQ3ZCV2 418 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 KIAA0319Q5VV43 1072 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 DCLRE1AQ6PJP8 1040 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.11■□□□□ 0.33
ACTB-206ENST00000443528 B3GALT6Q96L58 329 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 CBWD1Q9BRT8 395 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 CLEC1BQ9P126 229 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
ACTB-206ENST00000443528 C2CD2LO14523 706 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 CLASP2O75122 1294 aaKnown RBP17.1■□□□□ 0.33
ACTB-206ENST00000443528 B3GAT3O94766 335 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 RPN1P04843 607 aaKnown RBP17.1■□□□□ 0.33
ACTB-206ENST00000443528 BMP1P13497 986 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 GLUD2P49448 558 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 DSG1Q02413 1049 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 DPYDQ12882 1025 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 STK4Q13043 487 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 AAK1Q2M2I8 961 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 NELFCDQ8IXH7 590 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 SAAL1Q96ER3 474 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 KIF12Q96FN5 646 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 DDX27Q96GQ7 796 aaKnown RBP17.1■□□□□ 0.33
ACTB-206ENST00000443528 PCIF1Q9H4Z3 704 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 MRPL17Q9NRX2 175 aaKnown RBP17.1■□□□□ 0.33
ACTB-206ENST00000443528 EXOC1Q9NV70 894 aa17.1■□□□□ 0.33
ACTB-206ENST00000443528 PODXLO00592 558 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 URODP06132 367 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 CNPP09543 421 aaKnown RBP17.09■□□□□ 0.33
ACTB-206ENST00000443528 RPL9P32969 192 aaKnown RBP17.09■□□□□ 0.33
ACTB-206ENST00000443528 NDUFV1P49821 464 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 POU5F1Q01860 360 aaKnown RBP17.09■□□□□ 0.33
ACTB-206ENST00000443528 PSMD2Q13200 908 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 BMT2Q1RMZ1 405 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 USP41Q3LFD5 358 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 TJAP1Q5JTD0 557 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 JADE1Q6IE81 842 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 ARMCX5Q6P1M9 558 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 TMEM184AQ6ZMB5 413 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 CD302Q8IX05 232 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 KIAA0895Q8NCT3 520 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 FAM212AQ96EL1 285 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 MSLNLQ96KJ4 702 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 KLHL5Q96PQ7 755 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 FAM213AQ9BRX8 229 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 BARX2Q9UMQ3 279 aaPredicted RBP17.09■□□□□ 0.33
ACTB-206ENST00000443528 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.333e-7■■□□□ 13.7
ACTB-206ENST00000443528 UBE4BO95155 1302 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 CITO14578 2027 aa17.09■□□□□ 0.33
ACTB-206ENST00000443528 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.33
ACTB-206ENST00000443528 FSD2A1L4K1 749 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms