RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 EXTL3O43909 919 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 C2orf54Q08AI8 447 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 NFIL3Q16649 462 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 BMT2Q1RMZ1 405 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 PAPD7Q5XG87 772 aaKnown RBP11.32□□□□□ -0.6
NOD1-206ENST00000434755 FAM117BQ6P1L5 589 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 MMGT1Q8N4V1 131 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 SAMD15Q9P1V8 674 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 MYH2Q9UKX2 1941 aa11.32□□□□□ -0.6
NOD1-206ENST00000434755 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 RGS16O15492 202 aaPredicted RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 SLC4A1P02730 911 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 ACTN1P12814 892 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 MARSP56192 900 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 SP3Q02447 781 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 BFSP2Q13515 415 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 DHX34Q14147 1143 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 PLPPR4Q7Z2D5 763 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 CCDC110Q8TBZ0 833 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 HAS1Q92839 578 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 RBM41Q96IZ5 413 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 TRIM62Q9BVG3 475 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 PCSK1NQ9UHG2 260 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 PIN4Q9Y237 131 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 CNTNAP1P78357 1384 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 CES2O00748 559 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 CA12O43570 354 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 ECEL1O95672 775 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 KRT1P04264 644 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 CLTAP09496 248 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 CHRNA3P32297 505 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 PHBP35232 272 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 PSMC4P43686 418 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 SEZ6Q53EL9 994 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 HHATQ5VTY9 493 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 GABPB2Q8TAK5 448 aaPredicted RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 TBC1D31Q96DN5 1066 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 COL5A3P25940 1745 aaPredicted RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 RSPH10B2B2RC85 870 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 POC1B-GALNT4F8VUJ3 575 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 H3BRB1 525 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 HUS1O60921 280 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 RSPH10BP0C881 870 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 YY1P25490 414 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 AXLP30530 894 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 HNRNPH3P31942 346 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 ICAM3P32942 547 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 MAP3K10Q02779 954 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 ZNF410Q86VK4 478 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 ZBED3Q96IU2 234 aaPredicted RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 MBOAT7Q96N66 472 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 RUSC1Q9BVN2 902 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 TARS2Q9BW92 718 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 TUT1Q9H6E5 874 aaKnown RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 PACSIN2Q9UNF0 486 aaPredicted RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 CHD4Q14839 1912 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 TRAPPC3O43617 180 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 CYP2C8P10632 490 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 ATF2P15336 505 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 ELF1P32519 619 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 RARRES1P49788 294 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 RTP1P59025 263 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 IL17AQ16552 155 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 SYDE1Q6ZW31 735 aaPredicted RBP11.31□□□□□ -0.6
NOD1-206ENST00000434755 TRAPPC11Q7Z392 1133 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
NOD1-206ENST00000434755 M0R2N6 131 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 PIK3R2O00459 728 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 PBX1P40424 430 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 NOVP48745 357 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 YWHAGP61981 247 aaKnown RBP eCLIP11.3□□□□□ -0.6
NOD1-206ENST00000434755 SNRNP35Q16560 246 aaKnown RBP11.3□□□□□ -0.6
NOD1-206ENST00000434755 ATF7IP2Q5U623 682 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 CCDC121Q6ZUS5 278 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 GPR142Q7Z601 462 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 SLC9A9Q8IVB4 645 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 TTC13Q8NBP0 860 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 ETNPPLQ8TBG4 499 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 CNOT10Q9H9A5 744 aaKnown RBP11.3□□□□□ -0.6
NOD1-206ENST00000434755 PDE11AQ9HCR9 933 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 ABCB6Q9NP58 842 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 LY75O60449 1722 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 GPR182O15218 404 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 HOXA2O43364 376 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 CSDE1O75534 798 aaKnown RBP11.3□□□□□ -0.6
NOD1-206ENST00000434755 SARNPP82979 210 aaKnown RBP11.3□□□□□ -0.6
NOD1-206ENST00000434755 RBP5P82980 135 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 ZNF211Q13398 564 aaPredicted RBP11.3□□□□□ -0.6
NOD1-206ENST00000434755 CELF3Q5SZQ8 465 aaKnown RBP11.3□□□□□ -0.6
NOD1-206ENST00000434755 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
NOD1-206ENST00000434755 SPATA4Q8NEY3 305 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 ATP8A1Q9Y2Q0 1164 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 ZMYM2Q9UBW7 1377 aa11.3□□□□□ -0.6
NOD1-206ENST00000434755 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms