RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GPR65Q8IYL9 337 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 IQUBQ8NA54 791 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 SUSD6Q92537 303 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 RPGRIP1Q96KN7 1286 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 FBXL18Q96ME1 805 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 RIPOR3Q96MK2 946 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 NECTIN4Q96NY8 510 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 MSTO1Q9BUK6 570 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 C1QTNF1Q9BXJ1 281 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 CUEDC2Q9H467 287 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 ST6GALNAC4Q9H4F1 302 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 PLEKHA5Q9HAU0 1116 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 RXFP1Q9HBX9 757 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 FAM13BQ9NYF5 915 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 FNIP2Q9P278 1114 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 EXOC7Q9UPT5 735 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 VWA8A3KMH1 1905 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 MYO10Q9HD67 2058 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 A0A087X0B3 334 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 TMEM189-UBE2V1I3L0A0 370 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 OGTO15294 1046 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 PIGRP01833 764 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 CXCL8P10145 99 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 RPL9P32969 192 aaKnown RBP12.22□□□□□ -0.45
RFFL-204ENST00000414419 DNM1Q05193 864 aaKnown RBP12.22□□□□□ -0.45
RFFL-204ENST00000414419 PPP2R3AQ06190 1150 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 UPP1Q16831 310 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 SLC10A6Q3KNW5 377 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 ZC2HC1CQ53FD0 456 aaPredicted RBP12.22□□□□□ -0.45
RFFL-204ENST00000414419 ZNF720Q7Z2F6 126 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 PALB2Q86YC2 1186 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 MAP4K3Q8IVH8 894 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 GLYCTKQ8IVS8 523 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 CCDC65Q8IXS2 484 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 C12orf76Q8N812 135 aaPredicted RBP12.22□□□□□ -0.45
RFFL-204ENST00000414419 DHX58Q96C10 678 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 HVCN1Q96D96 273 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 TNMDQ9H2S6 317 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 SFXN1Q9H9B4 322 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
RFFL-204ENST00000414419 GOLGA2P5Q9HBQ8 144 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 PANK4Q9NVE7 773 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 TBC1D7Q9P0N9 293 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 CNTN3Q9P232 1028 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 NUB1Q9Y5A7 615 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 ATP6V1DQ9Y5K8 247 aa12.22□□□□□ -0.45
RFFL-204ENST00000414419 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.22□□□□□ -0.45
RFFL-204ENST00000414419 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 MUC3AQ02505 3323 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 PODXLO00592 558 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 XPOTO43592 962 aaKnown RBP12.21□□□□□ -0.45
RFFL-204ENST00000414419 GCNT3O95395 438 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 PSMD5Q16401 504 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 RTP2Q5QGT7 225 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 ADALQ6DHV7 355 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 PRSS55Q6UWB4 352 aaPredicted RBP12.21□□□□□ -0.45
RFFL-204ENST00000414419 TMC5Q6UXY8 1006 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.45
RFFL-204ENST00000414419 STXBP4Q6ZWJ1 553 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 RNF135Q8IUD6 432 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 SYCP3Q8IZU3 236 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 PIK3R5Q8WYR1 880 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 DNAJC19Q96DA6 116 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 FAM212AQ96EL1 285 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 ZMAT2Q96NC0 199 aaKnown RBP12.21□□□□□ -0.45
RFFL-204ENST00000414419 ACCSQ96QU6 501 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 FIZ1Q96SL8 496 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 PYM1Q9BRP8 204 aaKnown RBP12.21□□□□□ -0.45
RFFL-204ENST00000414419 EPHX3Q9H6B9 360 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 MAN1C1Q9NR34 630 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 PCDHA7Q9UN72 937 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 NR2E1Q9Y466 385 aa12.21□□□□□ -0.45
RFFL-204ENST00000414419 A0A0B4J269 797 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 LOC730098B7Z3J9 87 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 PI4K2BG5E9Z4 385 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 TULP1O00294 542 aaPredicted RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 POLR2DO15514 142 aaKnown RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 DCXO43602 365 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 C1RP00736 705 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 WEE2P0C1S8 567 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 SPATA31D3P0C874 917 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 MYBP10242 640 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 SP100P23497 879 aaPredicted RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 TNFSF9P41273 254 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 KRT85P78386 507 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 SOX4Q06945 474 aaPredicted RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 ALCAMQ13740 583 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 POSTNQ15063 836 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 KANK3Q6NY19 840 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 SHC4Q6S5L8 630 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 SPATA31D4Q6ZUB0 917 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 CD302Q8IX05 232 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 LNX1Q8TBB1 728 aaPredicted RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 HDAC7Q8WUI4 952 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 POMGNT1Q8WZA1 660 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms