RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TDRD15B5MCY1 1934 aaKnown RBP15.02■□□□□ -0
CXCL12-205ENST00000395794 TMEM221A6NGB7 291 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 C2CD4DB7Z1M9 353 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 TMEM189-UBE2V1I3L0A0 370 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 M0R296 226 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 TRAK2O60296 914 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 MYBP10242 640 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 KCNE1P15382 129 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 RPL17P18621 184 aaKnown RBP15.02■□□□□ -0
CXCL12-205ENST00000395794 KYAT1Q16773 422 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 UPP1Q16831 310 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 XKR4Q5GH76 650 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 SPECC1Q5M775 1068 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 LIN9Q5TKA1 542 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 RRAGBQ5VZM2 374 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 FAM173BQ6P4H8 233 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 ALKAL1Q6UXT8 129 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 ZDHHC14Q8IZN3 488 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 KREMEN2Q8NCW0 462 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 PIK3R5Q8WYR1 880 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 STAMQ92783 540 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 SNX21Q969T3 373 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 EPSTI1Q96J88 318 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 ZBTB45Q96K62 511 aaPredicted RBP15.02■□□□□ -0
CXCL12-205ENST00000395794 SNX27Q96L92 541 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 ZDHHC7Q9NXF8 308 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 STK17AQ9UEE5 414 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 FBXO2Q9UK22 296 aaPredicted RBP15.02■□□□□ -0
CXCL12-205ENST00000395794 TBX20Q9UMR3 447 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 MTMR6Q9Y217 621 aa15.02■□□□□ -0
CXCL12-205ENST00000395794 ARIH1Q9Y4X5 557 aaPredicted RBP15.02■□□□□ -0
CXCL12-205ENST00000395794 HNRNPDLO14979 420 aaKnown RBP15.01□□□□□ -0.01
CXCL12-205ENST00000395794 CLTAP09496 248 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 PDIA4P13667 645 aaKnown RBP15.01□□□□□ -0.01
CXCL12-205ENST00000395794 RPL9P32969 192 aaKnown RBP15.01□□□□□ -0.01
CXCL12-205ENST00000395794 ZNF131P52739 623 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 MCL1Q07820 350 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 SIGLEC14Q08ET2 396 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 MTMR3Q13615 1198 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 UBALD2Q8IYN6 164 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 LNX1Q8TBB1 728 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-205ENST00000395794 SMG7Q92540 1137 aaKnown RBP15.01□□□□□ -0.01
CXCL12-205ENST00000395794 PBXIP1Q96AQ6 731 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 ZNF396Q96N95 335 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-205ENST00000395794 GOLGA2P5Q9HBQ8 144 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 CNTN3Q9P232 1028 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 LIMD1Q9UGP4 676 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 SORCS3Q9UPU3 1222 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 NUB1Q9Y5A7 615 aa15.01□□□□□ -0.01
CXCL12-205ENST00000395794 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.01□□□□□ -0.01
CXCL12-205ENST00000395794 PODXLO00592 558 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 ABLIM1O14639 778 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 RFPL2O75678 378 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 FGFR3P22607 806 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 SLC39A14Q15043 492 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 STK38Q15208 465 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 SEZ6Q53EL9 994 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 LILRA6Q6PI73 481 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 CCDC73Q6ZRK6 1079 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 HFE2Q6ZVN8 426 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 ANKS3Q6ZW76 656 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 SV2BQ7L1I2 683 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 SUGP1Q8IWZ8 645 aaKnown RBP15□□□□□ -0.01
CXCL12-205ENST00000395794 FAM122AQ96E09 287 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 CLIC6Q96NY7 704 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 CLSTN3Q9BQT9 956 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 RHOBTB2Q9BYZ6 727 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 PLEKHA5Q9HAU0 1116 aa15□□□□□ -0.01
CXCL12-205ENST00000395794 XPOTO43592 962 aaKnown RBP14.99□□□□□ -0.01
CXCL12-205ENST00000395794 PRR29P0C7W0 189 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 STAT6P42226 847 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 PPP2R3AQ06190 1150 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 SLC10A6Q3KNW5 377 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 PPM1LQ5SGD2 360 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 USP49Q70CQ1 688 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 BMP8AQ7Z5Y6 402 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 KCNN1Q92952 543 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 ZMAT2Q96NC0 199 aaKnown RBP14.99□□□□□ -0.01
CXCL12-205ENST00000395794 USP28Q96RU2 1077 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 PRKD2Q9BZL6 878 aa14.99□□□□□ -0.01
CXCL12-205ENST00000395794 WDR6Q9NNW5 1121 aaKnown RBP14.99□□□□□ -0.01
CXCL12-205ENST00000395794 H7C4K7 107 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 I3L4J1 428 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 OGTO15294 1046 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 ZMYND10O75800 440 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 HNRNPA1P09651 372 aaKnown RBP eCLIP14.98□□□□□ -0.01
CXCL12-205ENST00000395794 CXCL8P10145 99 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 TKTP29401 623 aaKnown RBP14.98□□□□□ -0.01
CXCL12-205ENST00000395794 GBP2P32456 591 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-205ENST00000395794 OR1D2P34982 312 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 SOX4Q06945 474 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-205ENST00000395794 RAB33AQ14088 237 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 SLFN12LQ6IEE8 588 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 DYMQ7RTS9 669 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 LRRC15Q8TF66 581 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 C18orf25Q96B23 403 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-205ENST00000395794 MSTO1Q9BUK6 570 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 RPF1Q9H9Y2 349 aaKnown RBP14.98□□□□□ -0.01
CXCL12-205ENST00000395794 MTRRQ9UBK8 725 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 SEL1LQ9UBV2 794 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms