RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CPA5Q8WXQ8 436 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 SENP7Q9BQF6 1050 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 RPAP3Q9H6T3 665 aaPredicted RBP11.69□□□□□ -0.54
BEST1-201ENST00000378043 C17orf75Q9HAS0 396 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 TCEAL9Q9UHQ7 104 aa11.69□□□□□ -0.54
BEST1-201ENST00000378043 O00370 1275 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 RASGRF2O14827 1237 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 RASSF9O75901 435 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 NR3C2P08235 984 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 KCNA2P16389 499 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 MAPK4P31152 587 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 KRT17Q04695 432 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 SGO2Q562F6 1265 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 BRDTQ58F21 947 aaPredicted RBP11.68□□□□□ -0.54
BEST1-201ENST00000378043 LMBRD2Q68DH5 695 aaPredicted RBP11.68□□□□□ -0.54
BEST1-201ENST00000378043 CCDC25Q86WR0 208 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 CCT6BQ92526 530 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 ATG4CQ96DT6 458 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 RUNDC3BQ96NL0 473 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 CDC42EP4Q9H3Q1 356 aaKnown RBP11.68□□□□□ -0.54
BEST1-201ENST00000378043 CFHP08603 1231 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 CHKAP35790 457 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 CLDN10P78369 228 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 PLCB4Q15147 1175 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 PPP1R7Q15435 360 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 CCDC38Q502W7 563 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 MFSD5Q6N075 450 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 SWSAP1Q6NVH7 229 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 NLRX1Q86UT6 975 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 RDM1Q8NG50 284 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
BEST1-201ENST00000378043 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
BEST1-201ENST00000378043 WHRNQ9P202 907 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 ARHGAP28Q9P2N2 729 aa11.68□□□□□ -0.54
BEST1-201ENST00000378043 R3HDM2Q9Y2K5 976 aaKnown RBP11.68□□□□□ -0.54
BEST1-201ENST00000378043 PTPRJQ12913 1337 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 GARTP22102 1010 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 LONRF1Q17RB8 773 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 PIGWQ7Z7B1 504 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 EXOC3L1Q86VI1 746 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 CCDC60Q8IWA6 550 aaPredicted RBP11.67□□□□□ -0.54
BEST1-201ENST00000378043 PRMT1Q99873 361 aaKnown RBP11.67□□□□□ -0.54
BEST1-201ENST00000378043 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 RNF146Q9NTX7 359 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 UMODL1Q5DID0 1318 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 ZC3H11AO75152 810 aaKnown RBP eCLIP11.67□□□□□ -0.54
BEST1-201ENST00000378043 CYP1A1P04798 512 aaPredicted RBP11.67□□□□□ -0.54
BEST1-201ENST00000378043 CREB1P16220 341 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 DPEP1P16444 411 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 CDR1P51861 262 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 CALCOCO2Q13137 446 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 ZACNQ401N2 412 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 LACTB2Q53H82 288 aaPredicted RBP11.67□□□□□ -0.54
BEST1-201ENST00000378043 SPOPLQ6IQ16 392 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 ENOSF1Q7L5Y1 443 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 OTUD6AQ7L8S5 288 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 NIM1KQ8IY84 436 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 LRRC34Q8IZ02 419 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 GPRASP2Q96D09 838 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 HAPLN2Q9GZV7 340 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 INTS9Q9NV88 658 aaKnown RBP11.67□□□□□ -0.54
BEST1-201ENST00000378043 PCDHB2Q9Y5E7 798 aa11.67□□□□□ -0.54
BEST1-201ENST00000378043 GOLGA6L7A0A1B0GV03 622 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ZBED4O75132 1171 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 DGAT1O75907 488 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ACSL3O95573 720 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ACO1P21399 889 aaKnown RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 SCTRP47872 440 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 RTP1P59025 263 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 SP4Q02446 784 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 KLF1Q13351 362 aaPredicted RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 TRIP13Q15645 432 aaPredicted RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 TDRD10Q5VZ19 366 aaKnown RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 TRMT10CQ7L0Y3 403 aaKnown RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 USP37Q86T82 979 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 REPS2Q8NFH8 660 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ACTR5Q9H9F9 607 aaPredicted RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 SLC40A1Q9NP59 571 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 C1orf112Q9NSG2 853 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 NEU2Q9Y3R4 380 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 FOXO6A8MYZ6 492 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 VNN1O95497 513 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 C4BPAP04003 597 aaKnown RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 CCND2P30279 289 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 DSG3P32926 999 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 NLRP11P59045 1033 aaKnown RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 CENPCQ03188 943 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ENPEPQ07075 957 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 SF3A3Q12874 501 aaKnown RBP eCLIP11.66□□□□□ -0.54
BEST1-201ENST00000378043 CNGA2Q16280 664 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 XRRA1Q6P2D8 792 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 CRELD2Q6UXH1 353 aaPredicted RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 MON1BQ7L1V2 547 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ANKS1BQ7Z6G8 1248 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 CROCCP2Q86T23 111 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ATP6V0A1Q93050 837 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 PWWP2AQ96N64 755 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 DCLK3Q9C098 648 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms