RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TLE6Q9H808 572 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 MINDY3Q9H8M7 445 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 ENTPD7Q9NQZ7 604 aa11.31□□□□□ -0.6
COL5A1-202ENST00000371820 PRMT7Q9NVM4 692 aaPredicted RBP11.31□□□□□ -0.6
COL5A1-202ENST00000371820 TECTAO75443 2155 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 FSCN2O14926 492 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 TSPAN1O60635 241 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ITGA4P13612 1032 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 CYP11B2P19099 503 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 FECHP22830 423 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 NAMPTP43490 491 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 BCAR1P56945 870 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 MBTD1Q05BQ5 628 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ELF2Q15723 593 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 DUSP6Q16828 381 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 TMEM132AQ24JP5 1023 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ARHGAP29Q52LW3 1261 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ZNF658Q5TYW1 1059 aaPredicted RBP11.3□□□□□ -0.6
COL5A1-202ENST00000371820 CDKAL1Q5VV42 579 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 CYP26C1Q6V0L0 522 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 LRRC55Q6ZSA7 311 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 HFE2Q6ZVN8 426 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ZNF771Q7L3S4 317 aaPredicted RBP11.3□□□□□ -0.6
COL5A1-202ENST00000371820 MAEAQ7L5Y9 396 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 MRPL10Q7Z7H8 261 aaKnown RBP11.3□□□□□ -0.6
COL5A1-202ENST00000371820 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 TXLNBQ8N3L3 684 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 VN1R2Q8NFZ6 395 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 DEPTORQ8TB45 409 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 HNRNPLLQ8WVV9 542 aaKnown RBP11.3□□□□□ -0.6
COL5A1-202ENST00000371820 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 RPGRIP1Q96KN7 1286 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 NT5C3AQ9H0P0 336 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 KCNH6Q9H252 994 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ARFGAP3Q9NP61 516 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ZNHIT6Q9NWK9 470 aaKnown RBP11.3□□□□□ -0.6
COL5A1-202ENST00000371820 DNM3Q9UQ16 869 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
COL5A1-202ENST00000371820 USP15Q9Y4E8 981 aaPredicted RBP11.3□□□□□ -0.6
COL5A1-202ENST00000371820 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.29□□□□□ -0.6
COL5A1-202ENST00000371820 A0A1W2PQC6 194 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 SLC26A4O43511 780 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 ZC3H11AO75152 810 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL5A1-202ENST00000371820 EEF1GP26641 437 aaKnown RBP11.29□□□□□ -0.6
COL5A1-202ENST00000371820 HOXA11P31270 313 aaPredicted RBP11.29□□□□□ -0.6
COL5A1-202ENST00000371820 ERVFC1P60507 584 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 CUL4BQ13620 913 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 GIT2Q14161 759 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
COL5A1-202ENST00000371820 CBX2Q14781 532 aaPredicted RBP11.29□□□□□ -0.6
COL5A1-202ENST00000371820 MAPK6Q16659 721 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 ERCC6LQ2NKX8 1250 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 AGMOQ6ZNB7 445 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 ZNF662Q6ZS27 426 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 TMC7Q7Z402 723 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 APBB1IPQ7Z5R6 666 aaPredicted RBP11.29□□□□□ -0.6
COL5A1-202ENST00000371820 TMEM139Q8IV31 216 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 EDAQ92838 391 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 LPPQ93052 612 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 DHX58Q96C10 678 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 TCF25Q9BQ70 676 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 TMEM175Q9BSA9 504 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 TIPINQ9BVW5 301 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 TBC1D13Q9NVG8 400 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 MAGEC2Q9UBF1 373 aaPredicted RBP11.29□□□□□ -0.6
COL5A1-202ENST00000371820 PRDM4Q9UKN5 801 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 KIAA1024Q9UPX6 916 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 IPPQ9Y573 584 aa11.29□□□□□ -0.6
COL5A1-202ENST00000371820 TRIOO75962 3097 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 BICDL2A1A5D9 508 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 CCDC151A5D8V7 595 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 N4BP3O15049 544 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 PER2O15055 1255 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 TADA3O75528 432 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 ARF4P18085 180 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-202ENST00000371820 BMP6P22004 513 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 PBX1P40424 430 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 EFNA5P52803 228 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 KRT83P78385 493 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 PAK1Q13153 545 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 KCNC3Q14003 757 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 TERF2Q15554 542 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 WHAMMP3Q1A5X7 153 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 UBXN11Q5T124 520 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 CDCA2Q69YH5 1023 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-202ENST00000371820 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms