RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 CYP4F22Q6NT55 531 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 PPP1R18Q6NYC8 613 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 GBP7Q8N8V2 638 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 SLC35G2Q8TBE7 412 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 FBF1Q8TES7 1133 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 RIOK1Q9BRS2 568 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 BHMT2Q9H2M3 363 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 KCTD10Q9H3F6 313 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 EBF3Q9H4W6 596 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 ZNF287Q9HBT7 754 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 IL17RBQ9NRM6 502 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 INTUQ9ULD6 942 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 PCDHA4Q9UN74 947 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 MAGED2Q9UNF1 606 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 FGRP09769 529 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 FAM196AQ6ZSG2 479 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 PPM1KQ8N3J5 372 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 INPP5DQ92835 1189 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 PPP1R16BQ96T49 567 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 NT5C3AQ9H0P0 336 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 ACP6Q9NPH0 428 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 ANAPC4Q9UJX5 808 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 SORBS2O94875 1100 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 SMIM18P0DKX4 95 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 COL6A2P12110 1019 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 ZNF24P17028 368 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 AP1B1Q10567 949 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 SLC1A5Q15758 541 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 TTC7BQ86TV6 843 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 CCDC65Q8IXS2 484 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 MAGEB18Q96M61 343 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 SRPK1Q96SB4 655 aaKnown RBP9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 POLR3CQ9BUI4 534 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 HEMGNQ9BXL5 484 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 ARMCX3Q9UH62 379 aaPredicted RBP9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 CHMP2BQ9UQN3 213 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 ABCB11O95342 1321 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 SPATA31A5Q5VU36 1347 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 SPATA31A7Q8IWB4 1347 aa9.31□□□□□ -0.92
SMARCA1-203ENST00000371123 CNTRLQ7Z7A1 2325 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 GSC2O15499 205 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 SPAG7O75391 227 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 PSMG1O95456 288 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 PON1P27169 355 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 DRG2P55039 364 aaKnown RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 LMBRD2Q68DH5 695 aaPredicted RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 FBXL19Q6PCT2 694 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 RAPH1Q70E73 1250 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 AGGF1Q8N302 714 aaeCLIP9.3□□□□□ -0.922e-6■□□□□ 9.2
SMARCA1-203ENST00000371123 GUF1Q8N442 669 aaKnown RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 LRRC8CQ8TDW0 803 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 NAT14Q8WUY8 206 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 CLPTM1LQ96KA5 538 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 EDEM3Q9BZQ6 932 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 DCLRE1BQ9H816 532 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 KCNK13Q9HB14 408 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 PHTF1Q9UMS5 762 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 TDRKHQ9Y2W6 561 aaKnown RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 F5H423 210 aaPredicted RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 MAGEB2O15479 319 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 SLC37A4O43826 429 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 PIAS1O75925 651 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 CALCAP01258 141 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 BRAFP15056 766 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 UCHL3P15374 230 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 HPCAP84074 193 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 ITPK1Q13572 414 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 PPP2R5DQ14738 602 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 BTNL9Q6UXG8 535 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 ZNF804AQ7Z570 1209 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 LCA5Q86VQ0 697 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 ZFPM1Q8IX07 1006 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 IFT74Q96LB3 600 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 SCOCQ9UIL1 159 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 COL4A3BPQ9Y5P4 624 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 HLA-DOAP06340 250 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 CDK4P11802 303 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 RARGP13631 454 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 GTF2H1P32780 548 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 CDK8P49336 464 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 MAPK6Q16659 721 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 KYNUQ16719 465 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 MTDHQ86UE4 582 aaKnown RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 MAML1Q92585 1016 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 CLIC5Q9NZA1 410 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 KIAA1522Q9P206 1035 aaPredicted RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 NAALADL1Q9UQQ1 740 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 USH1CQ9Y6N9 552 aa9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.3□□□□□ -0.92
SMARCA1-203ENST00000371123 A0A1B0GTW7 788 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 MYOCOSA0A1B0GUC4 107 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 STK10O94804 968 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 DYNC1I2Q13409 638 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 SHROOM1Q2M3G4 852 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 Q4G0T1 1027 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 ZNF394Q53GI3 561 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 CES4AQ5XG92 561 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 OTOAQ7RTW8 1153 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms