RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 PTK6Q13882 451 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 SLC30A10Q6XR72 485 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ZC3H18Q86VM9 953 aaKnown RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 RELL1Q8IUW5 271 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 MAK16Q9BXY0 300 aaKnown RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 LRRC27Q9C0I9 530 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 CCNFP41002 786 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 SLC34A1Q06495 639 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 PPP2R5CQ13362 524 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 TTBK2Q6IQ55 1244 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 C16orf86Q6ZW13 317 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 INTS8Q75QN2 995 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 RPUSD2Q8IZ73 545 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 SYT2Q8N9I0 419 aaPredicted RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 FBXO6Q9NRD1 293 aaPredicted RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 TAS2R1Q9NYW7 299 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 STX18Q9P2W9 335 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 APEX2Q9UBZ4 518 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 PASKQ96RG2 1323 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 MIF4GDA9UHW6 222 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 RASA4BC9J798 803 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 C2CD2LO14523 706 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 MAPK13O15264 365 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 RASA4O43374 803 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 BUD23O43709 281 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 PIAS1O75925 651 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 KLF1Q13351 362 aaPredicted RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 C1QTNF12Q5T7M4 302 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 CES4AQ5XG92 561 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 NLRP9Q7RTR0 991 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 SKA1Q96BD8 255 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 MBOAT7Q96N66 472 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 INTS2Q9H0H0 1204 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 UBN1Q9NPG3 1134 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 ETNK2Q9NVF9 386 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 DNAAF2Q9NVR5 837 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 RPL26L1Q9UNX3 145 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 GRIN3BO60391 1043 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 ECEL1O95672 775 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 GGPS1O95749 300 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 GSTA2P09210 222 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 SLC45A4Q5BKX6 768 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 CAVIN4Q5BKX8 364 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 NOP9Q86U38 636 aaKnown RBP12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 MAPKAPK5Q8IW41 473 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 C4orf33Q8N1A6 199 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 MZB1Q8WU39 189 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 EYA3Q99504 573 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 DMAC2Q9NW81 257 aa12.43□□□□□ -0.42
SMARCA1-201ENST00000371121 A6NJR5 290 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 CDH16O75309 829 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 NMT1P30419 496 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 OVGP1Q12889 678 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 ARHGAP44Q17R89 818 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 VPS36Q86VN1 386 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 CFAP61Q8NHU2 1237 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 PLEKHO2Q8TD55 490 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 PLEKHG4BQ96PX9 1271 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 WDR83Q9BRX9 315 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 ZHX3Q9H4I2 956 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 NPHS2Q9NP85 383 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 SGPL1O95470 568 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 ITIH2P19823 946 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 MAGEA10P43363 369 aaPredicted RBP12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 TMED2Q15363 201 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 SLC5A5Q92911 643 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 SNF8Q96H20 258 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 BTBD10Q9BSF8 475 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 SCOCQ9UIL1 159 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 ADAMTSL1Q8N6G6 1762 aa12.42□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L15C9J2P7 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L13C9JLJ4 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L11C9JVI0 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L18D6R9N7 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L22D6RA61 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L17D6RBQ6 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L19D6RCP7 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L20D6RJB6 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 F5H6K3 240 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 HSPA6P17066 643 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 KLRC2P26717 231 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 SSR1P43307 286 aaKnown RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 BPIFB4P59827 614 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 LLGL2Q6P1M3 1020 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 USP17L6PQ6QN14 398 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 RHOT2Q8IXI1 618 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 ADGRF4Q8IZF3 695 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 ZNF75CPQ92670 426 aaPredicted RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 ZNF184Q99676 751 aaPredicted RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 PAIP2Q9BPZ3 127 aaKnown RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 RTFDC1Q9BY42 306 aaPredicted RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 OR6B1O95007 311 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 CALCAP01258 141 aa12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 PIM1P11309 404 aaPredicted RBP12.41□□□□□ -0.42
SMARCA1-201ENST00000371121 ERFP50548 548 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms