RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 KLC2Q9H0B6 622 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 ESYT2A0FGR8 921 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 P4HA1P13674 534 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 TMEM35BQ8NCS4 154 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 BTBD6Q96KE9 485 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 MYLK2Q9H1R3 596 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 PNMA3Q9UL41 463 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 CCPG1Q9ULG6 757 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 C21orf2O43822 256 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 CBX6O95503 412 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 FECHP22830 423 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 MTM1Q13496 603 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 RIPK1Q13546 671 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 ZNF394Q53GI3 561 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 C3orf62Q6ZUJ4 267 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 HSPH1Q92598 858 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 CYP39A1Q9NYL5 469 aa16.88■□□□□ 0.29
CLSTN1-201ENST00000361311 KRT16P08779 473 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 KRT10P13645 584 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 MPHOSPH6Q99547 160 aaKnown RBP16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 PAGR1Q9BTK6 254 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 UPF3AQ9H1J1 476 aaKnown RBP16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 A6NJR5 290 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 UNC5CO95185 931 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 MCF2P10911 925 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 NCALDP61601 193 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 KIF22Q14807 665 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 IZUMO2Q6UXV1 221 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 APTXQ7Z2E3 356 aaKnown RBP16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 GTF3C4Q9UKN8 822 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 RALAP11233 206 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 PECAM1P16284 738 aaPredicted RBP16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 RASA1P20936 1047 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 BTKQ06187 659 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 ARHGEF16Q5VV41 709 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 OPTNQ96CV9 577 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 TECPR2O15040 1411 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 DDX3XO00571 662 aaKnown RBP eCLIP16.87■□□□□ 0.294e-8■■■■■ 28.9
CLSTN1-201ENST00000361311 SORBS3O60504 671 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 AKAP3O75969 853 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 SCFD2Q8WU76 684 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 RIOK1Q9BRS2 568 aaKnown RBP16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 MRPL46Q9H2W6 279 aaKnown RBP16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 TLK1Q9UKI8 766 aa16.87■□□□□ 0.29
CLSTN1-201ENST00000361311 WNT7AO00755 349 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 ATP6V1B1P15313 513 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 CENPCQ03188 943 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 SLC34A1Q06495 639 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 KCTD19Q17RG1 926 aaPredicted RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 PRPF39Q86UA1 669 aaKnown RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 ARID3BQ8IVW6 561 aaPredicted RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 TRPV6Q9H1D0 765 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 NDUFA13Q9P0J0 144 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 NXF1Q9UBU9 619 aaKnown RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 CHMP2BQ9UQN3 213 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 FIS1Q9Y3D6 152 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 PRPSAP2O60256 369 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 ADCY3O60266 1144 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 EEF1DP29692 281 aaKnown RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 SCG3Q8WXD2 468 aaKnown RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 CPA5Q8WXQ8 436 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 ATP6V0A1Q93050 837 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 CALB1P05937 261 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 AKR1B1P15121 316 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 PEX5P50542 639 aa16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 AUHQ13825 339 aaKnown RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 ACBD5Q5T8D3 534 aaPredicted RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 PURBQ96QR8 312 aaKnown RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 SEPT9Q9UHD8 586 aaPredicted RBP16.86■□□□□ 0.29
CLSTN1-201ENST00000361311 PALM3A6NDB9 673 aaPredicted RBP16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 ZBED4O75132 1171 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 ENOSF1Q7L5Y1 443 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 CKAP2Q8WWK9 683 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 PCSK1NQ9UHG2 260 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 TRIM33Q9UPN9 1127 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 SSX2IPQ9Y2D8 614 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 NUDT17P0C025 328 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 RPA1P27694 616 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 GNA15P30679 374 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 FLT3P36888 993 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 STX3Q13277 289 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 PTK7Q13308 1070 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 TFDP2Q14188 446 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 CATSPER1Q8NEC5 780 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 CCDC138Q96M89 665 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 VPS11Q9H270 941 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 CCDC68Q9H2F9 335 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 SLC9A2Q9UBY0 812 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 MID2Q9UJV3 735 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 MGRN1O60291 552 aa16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 NMD3Q96D46 503 aaKnown RBP16.85■□□□□ 0.29
CLSTN1-201ENST00000361311 APOL6Q9BWW8 343 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms