RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 CD58P19256 250 aa16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 TRAPPC11Q7Z392 1133 aa16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 CCDC50Q8IVM0 306 aa16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 STRIP2Q9ULQ0 834 aa16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 IRF2BP2Q7Z5L9 587 aa16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 RBBP8NLQ8NC74 664 aaPredicted RBP16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 TSC1Q92574 1164 aa16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 BORCS6Q96GS4 357 aa16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 POP1Q99575 1024 aaKnown RBP16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 BCAS3Q9H6U6 928 aa16.71■□□□□ 0.27
CGGBP1-201ENST00000309534 ATICP31939 592 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 POU5F1Q01860 360 aaKnown RBP16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 FSTL1Q12841 308 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 PAK2Q13177 524 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 GNASQ5JWF2 1037 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 ADAM22Q9P0K1 906 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 KRIT1O00522 736 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 JAM2P57087 298 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 ZACNQ401N2 412 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 HGSNATQ68CP4 663 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 TAF2Q6P1X5 1199 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 ARHGEF19Q8IW93 802 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 KIF12Q96FN5 646 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 FEZ2Q9UHY8 353 aaPredicted RBP16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 Q9Y3F1 56 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 IBSPP21815 317 aaPredicted RBP16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 ZNF560Q96MR9 790 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 PCYT2Q99447 389 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 APOL6Q9BWW8 343 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 VTNP04004 478 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 APBA1Q02410 837 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 OLFML2BQ68BL8 750 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 SMYD5Q6GMV2 418 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 ZBTB45Q96K62 511 aaPredicted RBP16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 COQ4Q9Y3A0 265 aa16.7■□□□□ 0.26
CGGBP1-201ENST00000309534 ARHGEF37A1IGU5 675 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 STAG3L1P0CL83 205 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 CTNNA2P26232 953 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 MCL1Q07820 350 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 STILQ15468 1287 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 PHLDB3Q6NSJ2 640 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 TSHZ1Q6ZSZ6 1077 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 NME8Q8N427 588 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 ZNF564Q8TBZ8 553 aaPredicted RBP16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 RAB17Q9H0T7 212 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 SETD4Q9NVD3 440 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 GTF3C4Q9UKN8 822 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 REXO2Q9Y3B8 237 aaKnown RBP16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 RBM47A0AV96 593 aaKnown RBP16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 CYP11B1P15538 503 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 PSMC4P43686 418 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 TAP1Q03518 808 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 DNAJC24Q6P3W2 148 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 SHC3Q92529 594 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 WNT8AQ9H1J5 351 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 UTP11Q9Y3A2 253 aaKnown RBP16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 SMPD1P17405 629 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 FSCN1Q16658 493 aaKnown RBP16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 TWF2Q6IBS0 349 aaKnown RBP16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 SCARA5Q6ZMJ2 495 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 SLC35G2Q8TBE7 412 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 STYXL1Q9Y6J8 313 aa16.69■□□□□ 0.26
CGGBP1-201ENST00000309534 RASSF10A6NK89 507 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 CD4P01730 458 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 ATP4AP20648 1035 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 ADSSP30520 456 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 FAM71AQ8IYT1 594 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 PI4K2AQ9BTU6 479 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 NFKBIZQ9BYH8 718 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 PIN4Q9Y237 131 aaKnown RBP16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 CA12O43570 354 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 HADHQ16836 314 aaKnown RBP16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 CDCA2Q69YH5 1023 aaPredicted RBP16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 PCSK9Q8NBP7 692 aaKnown RBP16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 NUP85Q9BW27 656 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 SIX2Q9NPC8 291 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 OGFRQ9NZT2 677 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 HDAC6Q9UBN7 1215 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 POLR2AP24928 1970 aaKnown RBP16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 STBD1O95210 358 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 C22orf31O95567 290 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 SLC10A3P09131 477 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 CYP2C19P33261 490 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 ACAD10Q6JQN1 1059 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 ERICH1Q86X53 443 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 DDX3XO00571 662 aaKnown RBP eCLIP16.68■□□□□ 0.265e-15■■■■□ 21.9
CGGBP1-201ENST00000309534 RNASE9P60153 205 aaKnown RBP16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 TPCN2Q8NHX9 752 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 SNX25Q9H3E2 840 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 CYP3A43Q9HB55 503 aa16.68■□□□□ 0.26
CGGBP1-201ENST00000309534 SMIM35A0A1B0GVV1 85 aa16.67■□□□□ 0.26
CGGBP1-201ENST00000309534 HSF2BPO75031 334 aa16.67■□□□□ 0.26
CGGBP1-201ENST00000309534 SGPL1O95470 568 aa16.67■□□□□ 0.26
CGGBP1-201ENST00000309534 PNMA6AP0CW24 399 aaPredicted RBP16.67■□□□□ 0.26
CGGBP1-201ENST00000309534 SLC1A1P43005 524 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms