RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 GTF3C4Q9UKN8 822 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 PCDHGC5Q9Y5F6 944 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 IVNS1ABPQ9Y6Y0 642 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 KLC1Q07866 573 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 SLC26A7Q8TE54 656 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 ABTB1Q969K4 478 aaPredicted RBP17.58■□□□□ 0.4
SCAP-201ENST00000265565 SLC35C1Q96A29 364 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 SERPINB12Q96P63 405 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 POLR3FQ9H1D9 316 aaPredicted RBP17.58■□□□□ 0.4
SCAP-201ENST00000265565 GEMIN8Q9NWZ8 242 aaKnown RBP17.58■□□□□ 0.4
SCAP-201ENST00000265565 AKT3Q9Y243 479 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 MYBL1P10243 752 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 C1orf228Q6PIY5 440 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 C3orf62Q6ZUJ4 267 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 NT5DC3Q86UY8 548 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 TLK1Q9UKI8 766 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 C21orf2O43822 256 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 RFC1P35251 1148 aaPredicted RBP17.57■□□□□ 0.4
SCAP-201ENST00000265565 KCNA1Q09470 495 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 RABGAP1LQ5R372 815 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 LRRC55Q6ZSA7 311 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 SYDE1Q6ZW31 735 aaPredicted RBP17.57■□□□□ 0.4
SCAP-201ENST00000265565 PRPF38AQ8NAV1 312 aaKnown RBP17.57■□□□□ 0.4
SCAP-201ENST00000265565 TSSK1BQ9BXA7 367 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 NDE1Q9NXR1 346 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 BIRC2Q13490 618 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 GABPB2Q8TAK5 448 aaPredicted RBP17.57■□□□□ 0.4
SCAP-201ENST00000265565 ELMO3Q96BJ8 720 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 GPRC5CQ9NQ84 441 aa17.57■□□□□ 0.4
SCAP-201ENST00000265565 KRT7P08729 469 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 CDH6P55285 790 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 LRRC23Q53EV4 343 aaPredicted RBP17.56■□□□□ 0.4
SCAP-201ENST00000265565 SPOPLQ6IQ16 392 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 CBWD2Q8IUF1 395 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 MASTLQ96GX5 879 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 RTFDC1Q9BY42 306 aaPredicted RBP17.56■□□□□ 0.4
SCAP-201ENST00000265565 KDM4CQ9H3R0 1056 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 RNF146Q9NTX7 359 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 CHMP2BQ9UQN3 213 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 PCDHA10Q9Y5I2 948 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 HSPA4LO95757 839 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 FNTAP49354 379 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 ART3Q13508 389 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 TFDP1Q14186 410 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 AGR3Q8TD06 166 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 RPF1Q9H9Y2 349 aaKnown RBP17.56■□□□□ 0.4
SCAP-201ENST00000265565 FEM1BQ9UK73 627 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 PCDHB2Q9Y5E7 798 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 FSBPO95073 299 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 TBXAS1P24557 533 aaPredicted RBP17.56■□□□□ 0.4
SCAP-201ENST00000265565 SH3BGRP55822 239 aaPredicted RBP17.56■□□□□ 0.4
SCAP-201ENST00000265565 BCAR1P56945 870 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 PDZD4Q76G19 769 aaPredicted RBP17.56■□□□□ 0.4
SCAP-201ENST00000265565 DNAJC9Q8WXX5 260 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 SLC4A9Q96Q91 983 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 POLR3CQ9BUI4 534 aaPredicted RBP17.56■□□□□ 0.4
SCAP-201ENST00000265565 PIK3R2O00459 728 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 CNGA1P29973 690 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 EIF3EP60228 445 aaKnown RBP17.56■□□□□ 0.4
SCAP-201ENST00000265565 AADACL2Q6P093 401 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 TMEM154Q6P9G4 183 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 TRIM72Q6ZMU5 477 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 GADL1Q6ZQY3 521 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 MCEEQ96PE7 176 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 DLGAP2Q9P1A6 1054 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 INPP5FQ9Y2H2 1132 aa17.56■□□□□ 0.4
SCAP-201ENST00000265565 RPL21P46778 160 aaKnown RBP17.55■□□□□ 0.4
SCAP-201ENST00000265565 IQCKQ8N0W5 287 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 LRGUKQ96M69 825 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 POP1Q99575 1024 aaKnown RBP17.55■□□□□ 0.4
SCAP-201ENST00000265565 CENPKQ9BS16 269 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 CCDC22O60826 627 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 KRT10P13645 584 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 CASP5P51878 434 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 ALDH18A1P54886 795 aaKnown RBP17.55■□□□□ 0.4
SCAP-201ENST00000265565 ITGB3BPQ13352 177 aaPredicted RBP17.55■□□□□ 0.4
SCAP-201ENST00000265565 SP8Q8IXZ3 490 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 ARHGEF26Q96DR7 871 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 PSMC3IPQ9P2W1 217 aaPredicted RBP17.55■□□□□ 0.4
SCAP-201ENST00000265565 NVLO15381 856 aaKnown RBP17.55■□□□□ 0.4
SCAP-201ENST00000265565 ATP6V1G2O95670 118 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 ITKQ08881 620 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 SPP2Q13103 211 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 ITIH4Q14624 930 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 MAPK6Q16659 721 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 SMTNL2Q2TAL5 461 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 FBXO28Q9NVF7 368 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 PHTF1Q9UMS5 762 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 SLC4A7Q9Y6M7 1214 aa17.55■□□□□ 0.4
SCAP-201ENST00000265565 KRT3P12035 628 aa17.54■□□□□ 0.4
SCAP-201ENST00000265565 SFNP31947 248 aa17.54■□□□□ 0.4
SCAP-201ENST00000265565 AP2B1P63010 937 aa17.54■□□□□ 0.4
SCAP-201ENST00000265565 FAM102AQ5T9C2 384 aaPredicted RBP17.54■□□□□ 0.4
SCAP-201ENST00000265565 RBBP8NLQ8NC74 664 aaPredicted RBP17.54■□□□□ 0.4
SCAP-201ENST00000265565 RNF169Q8NCN4 708 aa17.54■□□□□ 0.4
SCAP-201ENST00000265565 TMEM143Q96AN5 459 aa17.54■□□□□ 0.4
SCAP-201ENST00000265565 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
SCAP-201ENST00000265565 AFG3L2Q9Y4W6 797 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms