RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 COPS2P61201 443 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 LRRC14Q15048 493 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
NOD1-201ENST00000222823 C1orf228Q6PIY5 440 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 TADA2BQ86TJ2 420 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 CCNYL1Q8N7R7 359 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 LRRC37BQ96QE4 947 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 VIPAS39Q9H9C1 493 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 SPATA31A6Q5VVP1 1343 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 H3BRJ5 948 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 POLRMTO00411 1230 aaKnown RBP12.17□□□□□ -0.46
NOD1-201ENST00000222823 PLA2G4AP47712 749 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 AP1B1Q10567 949 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 TKFCQ3LXA3 575 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 PRAMEF18Q5VWM3 479 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 TTI2Q6NXR4 508 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 CDC26Q8NHZ8 85 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 SPON2Q9BUD6 331 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 FAM96AQ9H5X1 160 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 KCNH7Q9NS40 1196 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 ABCF3Q9NUQ8 709 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 HPCAL4Q9UM19 191 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 PCDHB2Q9Y5E7 798 aa12.17□□□□□ -0.46
NOD1-201ENST00000222823 LRRC10BA6NIK2 292 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 F5H423 210 aaPredicted RBP12.16□□□□□ -0.46
NOD1-201ENST00000222823 ATP5HO75947 161 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 PDGFRAP16234 1089 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 RBP5P82980 135 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 YWHAHQ04917 246 aaPredicted RBP12.16□□□□□ -0.46
NOD1-201ENST00000222823 PDE1CQ14123 709 aaPredicted RBP12.16□□□□□ -0.46
NOD1-201ENST00000222823 E2F4Q16254 413 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 GRAMD1BQ3KR37 738 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 ITPRIPL1Q6GPH6 555 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 KRT80Q6KB66 452 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 CPA5Q8WXQ8 436 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 RUBCNQ92622 972 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 ANKS1AQ92625 1134 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 PIN4Q9Y237 131 aaKnown RBP12.16□□□□□ -0.46
NOD1-201ENST00000222823 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
NOD1-201ENST00000222823 GSTA4O15217 222 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 MAP3K7O43318 606 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 TYK2P29597 1187 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 EIF3EP60228 445 aaKnown RBP12.16□□□□□ -0.46
NOD1-201ENST00000222823 ESRRGP62508 458 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 PRKCEQ02156 737 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 POU5F1BQ06416 359 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 HIF1AQ16665 826 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 CATSPER3Q86XQ3 398 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 RBBP8NLQ8NC74 664 aaPredicted RBP12.16□□□□□ -0.46
NOD1-201ENST00000222823 OR6P1Q8NGX9 317 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 SPATA20Q8TB22 786 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 IFT43Q96FT9 208 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 AGBL1Q96MI9 1066 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 SLC13A1Q9BZW2 595 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 DEFB129Q9H1M3 183 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 ANGPTL2Q9UKU9 493 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 TRPA1O75762 1119 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 BTBD6Q96KE9 485 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 CYTH2Q99418 400 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
NOD1-201ENST00000222823 ARFGEF2Q9Y6D5 1785 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 NID2Q14112 1375 aa12.16□□□□□ -0.46
NOD1-201ENST00000222823 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 RARBP10826 455 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 MAGEA9P43362 315 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 RPS6P62753 249 aaKnown RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 BYSLQ13895 437 aaKnown RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 EMC2Q15006 297 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 FSCBQ5H9T9 825 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 FIGNQ5HY92 759 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 MFSD14CQ5VZR4 134 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 NUDCD3Q8IVD9 361 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 LRRN4CLQ8ND94 238 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 URGCPQ8TCY9 931 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 CCDC138Q96M89 665 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 TGS1Q96RS0 853 aaKnown RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 H0Y3Z8 333 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 EIF3DO15371 548 aaKnown RBP eCLIP12.15□□□□□ -0.46
NOD1-201ENST00000222823 MAGEB2O15479 319 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 ASAP2O43150 1006 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 HAUS5O94927 633 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 PRAMEP78395 509 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 STAT4Q14765 748 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 MMS22LQ6ZRQ5 1243 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 NLRP14Q86W24 1093 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 MOV10L1Q9BXT6 1211 aaKnown RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 FUT8Q9BYC5 575 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 TPX2Q9ULW0 747 aaKnown RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 PPME1Q9Y570 386 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 ORC6Q9Y5N6 252 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 KLRC1P26715 233 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 ARFIP2P53365 341 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 CDK17Q00537 523 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms