RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 KCNH2Q12809 1159 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
LINC00538-201ENST00000626109 KCNB1Q14721 858 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 TMEM266Q2M3C6 531 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 PRAMEF19Q5SWL8 479 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 ARMC4Q5T2S8 1044 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 LRCH2Q5VUJ6 765 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 BTN2A1Q7KYR7 527 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 SRGAP1Q7Z6B7 1085 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
LINC00538-201ENST00000626109 C4orf32Q8N8J7 132 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 CHAC2Q8WUX2 184 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 SLC5A5Q92911 643 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 ZBTB10Q96DT7 871 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 MTMR9Q96QG7 549 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 RIT2Q99578 217 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 ELAC2Q9BQ52 826 aaKnown RBP12.51□□□□□ -0.41
LINC00538-201ENST00000626109 BLZF1Q9H2G9 400 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 PDGFCQ9NRA1 345 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 DISC1Q9NRI5 854 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 TBC1D22BQ9NU19 505 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 CDC23Q9UJX2 597 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 MCM3APO60318 1980 aa12.51□□□□□ -0.41
LINC00538-201ENST00000626109 GAS7O60861 476 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 INHAP05111 366 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 CASP1P29466 404 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 PMLP29590 882 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 KRT20P35900 424 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 CCT6AP40227 531 aaKnown RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 ADCYAP1R1P41586 468 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 TXKP42681 527 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 GPS2Q13227 327 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 NEDD9Q14511 834 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 IQSEC1Q6DN90 963 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 IRGCQ6NXR0 463 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 RAD9BQ6WBX8 426 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 HS2ST1Q7LGA3 356 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 PLPP7Q8NBV4 271 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 HAS1Q92839 578 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 CRELD1Q96HD1 420 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 SARGQ9BW04 601 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 TEKT3Q9BXF9 490 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 AASDHPPTQ9NRN7 309 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 KCTD5Q9NXV2 234 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 FAM184BQ9ULE4 1060 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 NKRFO15226 690 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 FANCGO15287 622 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 ATP9AO75110 1047 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 ERLIN1O75477 346 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 TIPRLO75663 272 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 GFPT2O94808 682 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 NFASCO94856 1347 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 GYPCP04921 128 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 MYCLP1P12525 358 aaPredicted RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 AKR1A1P14550 325 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 EEF1GP26641 437 aaKnown RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 PFKPQ01813 784 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 TNFAIP2Q03169 654 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 TRIM32Q13049 653 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 ITGB3BPQ13352 177 aaPredicted RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 SLC9C1Q4G0N8 1177 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 ZNF569Q5MCW4 686 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 CCDC62Q6P9F0 684 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 FBXO46Q6PJ61 603 aaPredicted RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 GALNT5Q7Z7M9 940 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 TEX9Q8N6V9 391 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 STAMQ92783 540 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 AK8Q96MA6 479 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 CCSER1Q9C0I3 900 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 VPS16Q9H269 839 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 THAP9Q9H5L6 903 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
LINC00538-201ENST00000626109 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 BLOC1S4Q9NUP1 217 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 PCDHA12Q9UN75 941 aa12.5□□□□□ -0.41
LINC00538-201ENST00000626109 KIAA1217Q5T5P2 1943 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 CCDC151A5D8V7 595 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 J3KRW8 73 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 RTCAO00442 366 aaKnown RBP12.49□□□□□ -0.41
LINC00538-201ENST00000626109 PSMA7O14818 248 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 GGPS1O95749 300 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 MSL3P1P0C860 447 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 UBXN1Q04323 297 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 NR1H3Q13133 447 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 MTF1Q14872 753 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 DUSP28Q4G0W2 176 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 MAP3K21Q5TCX8 1036 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 GJA10Q969M2 543 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 PARD6BQ9BYG5 372 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
LINC00538-201ENST00000626109 MCM8Q9UJA3 840 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms