RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TATDN2Q93075 761 aa22.28■■□□□ 1.16
CNTNAP3B-212ENST00000617422 TCHPQ9BT92 498 aa22.28■■□□□ 1.16
CNTNAP3B-212ENST00000617422 NFKBIZQ9BYH8 718 aa22.28■■□□□ 1.16
CNTNAP3B-212ENST00000617422 CAPN6Q9Y6Q1 641 aa22.28■■□□□ 1.16
CNTNAP3B-212ENST00000617422 MYH10P35580 1976 aa22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 TBC1D8O95759 1140 aa22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 RFX1P22670 979 aa22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 PSMC4P43686 418 aa22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 PRPF4BQ13523 1007 aaKnown RBP22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 ZACNQ401N2 412 aa22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 RSRC2Q7L4I2 434 aaKnown RBP22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 OR5B17Q8NGF7 314 aa22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 NAGPAQ9UK23 515 aa22.27■■□□□ 1.16
CNTNAP3B-212ENST00000617422 VNN1O95497 513 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 LDHAP00338 332 aaKnown RBP22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TNNI1P19237 187 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 KIAA0753Q2KHM9 967 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ATF7IP2Q5U623 682 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 USP37Q86T82 979 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 PPM1KQ8N3J5 372 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CEP120Q8N960 986 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FNBP1Q96RU3 617 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 MOCS3O95396 460 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TEX35Q5T0J7 233 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SLC30A5Q8TAD4 765 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 GOLGA1Q92805 767 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ACP6Q9NPH0 428 aa22.26■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ENC1O14682 589 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SMIM10L2AP0DMW4 78 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SMIM10L2BP0DMW5 78 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 LACTBP83111 547 aaPredicted RBP22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TUBB2AQ13885 445 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 KIF22Q14807 665 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 PALB2Q86YC2 1186 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 IFNLR1Q8IU57 520 aaPredicted RBP22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 BRSK2Q8IWQ3 736 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TRIB2Q92519 343 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TUBB2BQ9BVA1 445 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TSGA10Q9BZW7 698 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ST7Q9NRC1 585 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 DAAM1Q9Y4D1 1078 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TRIP12Q14669 1992 aaPredicted RBP22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ANK1P16157 1881 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CTAGE9A4FU28 777 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 OGTO15294 1046 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 POU5F1BQ06416 359 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 MPZL3Q6UWV2 235 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TMEM192Q8IY95 271 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SLC20A1Q8WUM9 679 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SECISBP2LQ93073 1101 aaKnown RBP22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CGRRF1Q99675 332 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 NAPGQ99747 312 aaPredicted RBP22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 HDAC6Q9UBN7 1215 aa22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CPSF3Q9UKF6 684 aaKnown RBP22.25■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FAM170AA1A519 330 aa22.24■■□□□ 1.15
CNTNAP3B-212ENST00000617422 MYADML2A6NDP7 307 aa22.24■■□□□ 1.15
CNTNAP3B-212ENST00000617422 PHKA2P46019 1235 aa22.24■■□□□ 1.15
CNTNAP3B-212ENST00000617422 AMPD2Q01433 879 aa22.24■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CC2D1AQ6P1N0 951 aaPredicted RBP22.24■■□□□ 1.15
CNTNAP3B-212ENST00000617422 GLYCTKQ8IVS8 523 aa22.24■■□□□ 1.15
CNTNAP3B-212ENST00000617422 DHX38Q92620 1227 aaKnown RBP22.24■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CEP350Q5VT06 3117 aa22.24■■□□□ 1.15
CNTNAP3B-212ENST00000617422 GPR25O00155 361 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 HLA-DRAP01903 254 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ATP1A1P05023 1023 aaKnown RBP22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TMOD1P28289 359 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 OSTNP61366 133 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TMEM62Q0P6H9 643 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TRIM32Q13049 653 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 NAB2Q15742 525 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ZNF568Q3ZCX4 644 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SPOPLQ6IQ16 392 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 NFRKBQ6P4R8 1299 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ALKBH5Q6P6C2 394 aaKnown RBP22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 THNSL1Q8IYQ7 743 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FAM71AQ8IYT1 594 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SHC3Q92529 594 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CDT1Q9H211 546 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 MEFVO15553 781 aaPredicted RBP22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TOMM70O94826 608 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FLT3LGP49771 235 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TUBB4BP68371 445 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 MFSD10Q14728 455 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FAM187BQ17R55 369 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 CPB2Q96IY4 423 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 NT5C1BQ96P26 610 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ARFGAP3Q9NP61 516 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 PRMT7Q9NVM4 692 aaPredicted RBP22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 TNFSF13BQ9Y275 285 aa22.23■■□□□ 1.15
CNTNAP3B-212ENST00000617422 HAS3O00219 553 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 BUB1O43683 1085 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FCGRTP55899 365 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 RUFY4Q6ZNE9 571 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 NLRP7Q8WX94 980 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 UBXN6Q9BZV1 441 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 FAM49AQ9H0Q0 323 aaPredicted RBP22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 SGPL1O95470 568 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 MYL3P08590 195 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 USP8P40818 1118 aa22.22■■□□□ 1.15
CNTNAP3B-212ENST00000617422 ADAM17P78536 824 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms